Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.76■□□□□ 0.75
RPL3P39023 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.76■□□□□ 0.75
RPL3P39023 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPL3P39023 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
RPL3P39023 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RPL3P39023 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 KRT87P-202ENST00000534226 1464 ntBASIC19.75■□□□□ 0.75
RPL3P39023 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 IRS3P-201ENST00000223076 1006 ntBASIC19.75■□□□□ 0.75
RPL3P39023 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.75■□□□□ 0.75
RPL3P39023 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPL3P39023 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RPL3P39023 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.75■□□□□ 0.75
RPL3P39023 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPL3P39023 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPL3P39023 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.75■□□□□ 0.75
RPL3P39023 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.74■□□□□ 0.75
RPL3P39023 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.74■□□□□ 0.75
RPL3P39023 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RPL3P39023 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.74■□□□□ 0.75
RPL3P39023 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RPL3P39023 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPL3P39023 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPL3P39023 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL3P39023 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RPL3P39023 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RPL3P39023 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL3P39023 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.73■□□□□ 0.75
RPL3P39023 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.73■□□□□ 0.75
RPL3P39023 AC005837.3-201ENST00000612163 286 ntBASIC19.73■□□□□ 0.75
RPL3P39023 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.73■□□□□ 0.75
RPL3P39023 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RPL3P39023 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.73■□□□□ 0.75
RPL3P39023 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RPL3P39023 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPL3P39023 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
RPL3P39023 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 PLK5-205ENST00000642079 1969 ntBASIC19.72■□□□□ 0.75
RPL3P39023 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL3P39023 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 AC027612.3-201ENST00000413684 1047 ntBASIC19.72■□□□□ 0.75
RPL3P39023 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL3P39023 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.72■□□□□ 0.75
RPL3P39023 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.72■□□□□ 0.75
RPL3P39023 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPL3P39023 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RPL3P39023 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.72■□□□□ 0.75
RPL3P39023 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPL3P39023 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL3P39023 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RPL3P39023 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPL3P39023 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RPL3P39023 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPL3P39023 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms