Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 RAV2YDR202C 1056 nt1.56□□□□□ -2.16
RPB11P38902 RNH202YDR279W 1053 nt1.56□□□□□ -2.16
RPB11P38902 COX13YGL191W 390 nt1.56□□□□□ -2.16
RPB11P38902 RLP24YLR009W 600 nt1.56□□□□□ -2.16
RPB11P38902 ADI1YMR009W 540 nt1.56□□□□□ -2.16
RPB11P38902 YBL077WYBL077W 432 nt1.56□□□□□ -2.16
RPB11P38902 TRM82YDR165W 1335 nt1.56□□□□□ -2.16
RPB11P38902 RRP14YKL082C 1305 nt1.56□□□□□ -2.16
RPB11P38902 LRE1YCL051W 1752 nt1.56□□□□□ -2.16
RPB11P38902 UTP21YLR409C 2820 nt1.56□□□□□ -2.16
RPB11P38902 MGA2YIR033W 3342 nt1.56□□□□□ -2.16
RPB11P38902 VPS8YAL002W 3825 nt1.56□□□□□ -2.16
RPB11P38902 IPT1YDR072C 1584 nt1.55□□□□□ -2.16
RPB11P38902 YKR015CYKR015C 1707 nt1.55□□□□□ -2.16
RPB11P38902 ECM5YMR176W 4236 nt1.55□□□□□ -2.16
RPB11P38902 YGL218WYGL218W 651 nt1.55□□□□□ -2.16
RPB11P38902 YHR210CYHR210C 1026 nt1.55□□□□□ -2.16
RPB11P38902 UBC12YLR306W 567 nt1.55□□□□□ -2.16
RPB11P38902 RDN58-1RDN58-1 158 nt1.55□□□□□ -2.16
RPB11P38902 RDN58-2RDN58-2 158 nt1.55□□□□□ -2.16
RPB11P38902 URA5YML106W 681 nt1.55□□□□□ -2.16
RPB11P38902 YNL035CYNL035C 1170 nt1.55□□□□□ -2.16
RPB11P38902 LTO1YNL260C 597 nt1.55□□□□□ -2.16
RPB11P38902 YOR387CYOR387C 621 nt1.55□□□□□ -2.16
RPB11P38902 MSS18YPR134W 807 nt1.55□□□□□ -2.16
RPB11P38902 snR43snR43 209 nt1.55□□□□□ -2.16
RPB11P38902 VPS9YML097C 1356 nt1.55□□□□□ -2.16
RPB11P38902 RTP1YMR185W 2946 nt1.55□□□□□ -2.16
RPB11P38902 PKP2YGL059W 1476 nt1.55□□□□□ -2.16
RPB11P38902 YNL144CYNL144C 2223 nt1.55□□□□□ -2.16
RPB11P38902 TFB1YDR311W 1929 nt1.54□□□□□ -2.16
RPB11P38902 VTC3YPL019C 2508 nt1.54□□□□□ -2.16
RPB11P38902 YJL169WYJL169W 369 nt1.54□□□□□ -2.16
RPB11P38902 YJR020WYJR020W 333 nt1.54□□□□□ -2.16
RPB11P38902 SED5YLR026C 1023 nt1.54□□□□□ -2.16
RPB11P38902 LIP2YLR239C 987 nt1.54□□□□□ -2.16
RPB11P38902 ARR2YPR200C 393 nt1.54□□□□□ -2.16
RPB11P38902 PST1YDR055W 1335 nt1.54□□□□□ -2.16
RPB11P38902 BRE5YNR051C 1548 nt1.54□□□□□ -2.16
RPB11P38902 BIT61YJL058C 1632 nt1.54□□□□□ -2.16
RPB11P38902 ATG9YDL149W 2994 nt1.53□□□□□ -2.16
RPB11P38902 SEC4YFL005W 648 nt1.53□□□□□ -2.16
RPB11P38902 tT(UGU)HtT(UGU)H 72 nt1.53□□□□□ -2.16
RPB11P38902 YIL058WYIL058W 285 nt1.53□□□□□ -2.16
RPB11P38902 YLR290CYLR290C 834 nt1.53□□□□□ -2.16
RPB11P38902 PSK2YOL045W 3306 nt1.53□□□□□ -2.16
RPB11P38902 CDC60YPL160W 3273 nt1.53□□□□□ -2.16
RPB11P38902 LTP1YPR073C 486 nt1.53□□□□□ -2.16
RPB11P38902 CLB5YPR120C 1308 nt1.53□□□□□ -2.16
RPB11P38902 PIN3YPR154W 648 nt1.53□□□□□ -2.16
RPB11P38902 PEP1YBL017C 4740 nt1.53□□□□□ -2.16
RPB11P38902 YLR035C-AYLR035C-A 3468 nt1.53□□□□□ -2.17
RPB11P38902 GDI1YER136W 1356 nt1.52□□□□□ -2.17
RPB11P38902 CTH1YDR151C 978 nt1.52□□□□□ -2.17
RPB11P38902 AAD16YFL057C 459 nt1.52□□□□□ -2.17
RPB11P38902 YHR069C-AYHR069C-A 363 nt1.52□□□□□ -2.17
RPB11P38902 PAU14YIL176C 363 nt1.52□□□□□ -2.17
RPB11P38902 PAU1YJL223C 363 nt1.52□□□□□ -2.17
RPB11P38902 CSE4YKL049C 690 nt1.52□□□□□ -2.17
RPB11P38902 YLR444CYLR444C 303 nt1.52□□□□□ -2.17
RPB11P38902 YML094C-AYML094C-A 402 nt1.52□□□□□ -2.17
RPB11P38902 YPL142CYPL142C 318 nt1.52□□□□□ -2.17
RPB11P38902 DSS1YMR287C 2910 nt1.52□□□□□ -2.17
RPB11P38902 CBF2YGR140W 2871 nt1.52□□□□□ -2.17
RPB11P38902 SSP1YHR184W 1716 nt1.52□□□□□ -2.17
RPB11P38902 RTG3YBL103C 1461 nt1.51□□□□□ -2.17
RPB11P38902 JIP5YPR169W 1479 nt1.51□□□□□ -2.17
RPB11P38902 URB2YJR041C 3525 nt1.51□□□□□ -2.17
RPB11P38902 VPS34YLR240W 2628 nt1.51□□□□□ -2.17
RPB11P38902 APC2YLR127C 2562 nt1.51□□□□□ -2.17
RPB11P38902 YCR013CYCR013C 648 nt1.51□□□□□ -2.17
RPB11P38902 SEC31YDL195W 3822 nt1.51□□□□□ -2.17
RPB11P38902 YDL241WYDL241W 372 nt1.51□□□□□ -2.17
RPB11P38902 YER172C-AYER172C-A 381 nt1.51□□□□□ -2.17
RPB11P38902 TAN1YGL232W 870 nt1.51□□□□□ -2.17
RPB11P38902 YGR064WYGR064W 369 nt1.51□□□□□ -2.17
RPB11P38902 PEX21YGR239C 867 nt1.51□□□□□ -2.17
RPB11P38902 MPC3YGR243W 441 nt1.51□□□□□ -2.17
RPB11P38902 SSP2YOR242C 1116 nt1.51□□□□□ -2.17
RPB11P38902 SLN1YIL147C 3663 nt1.5□□□□□ -2.17
RPB11P38902 IRC10YOL015W 1761 nt1.5□□□□□ -2.17
RPB11P38902 CBS2YDR197W 1170 nt1.5□□□□□ -2.17
RPB11P38902 RTN1YDR233C 888 nt1.5□□□□□ -2.17
RPB11P38902 YGL138CYGL138C 1038 nt1.5□□□□□ -2.17
RPB11P38902 CLN2YPL256C 1638 nt1.5□□□□□ -2.17
RPB11P38902 NOP56YLR197W 1515 nt1.5□□□□□ -2.17
RPB11P38902 UTP6YDR449C 1323 nt1.49□□□□□ -2.17
RPB11P38902 SLF1YDR515W 1344 nt1.49□□□□□ -2.17
RPB11P38902 YGR114CYGR114C 390 nt1.49□□□□□ -2.17
RPB11P38902 YIR036W-AYIR036W-A 402 nt1.49□□□□□ -2.17
RPB11P38902 SRL3YKR091W 741 nt1.49□□□□□ -2.17
RPB11P38902 IRC21YMR073C 606 nt1.49□□□□□ -2.17
RPB11P38902 YMR306C-AYMR306C-A 390 nt1.49□□□□□ -2.17
RPB11P38902 YRO2YBR054W 1035 nt1.49□□□□□ -2.17
RPB11P38902 REV1YOR346W 2958 nt1.49□□□□□ -2.17
RPB11P38902 MUM3YOR298W 1440 nt1.49□□□□□ -2.17
RPB11P38902 YNR066CYNR066C 1311 nt1.48□□□□□ -2.17
RPB11P38902 PEX5YDR244W 1839 nt1.48□□□□□ -2.17
RPB11P38902 snR76snR76 109 nt1.48□□□□□ -2.17
RPB11P38902 IZH1YDR492W 951 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 54.8 ms