Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC6A4P31645 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC6A4P31645 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC6A4P31645 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A4P31645 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 AL591742.1-201ENST00000604433 565 ntBASIC21.48■■□□□ 1.03
SLC6A4P31645 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SLC6A4P31645 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC6A4P31645 LINC00565-201ENST00000562710 2331 ntBASIC21.47■■□□□ 1.03
SLC6A4P31645 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A4P31645 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A4P31645 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A4P31645 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC6A4P31645 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A4P31645 Z98882.1-201ENST00000622160 2253 ntBASIC21.47■■□□□ 1.03
SLC6A4P31645 TSPY6P-201ENST00000448518 926 ntBASIC21.47■■□□□ 1.03
SLC6A4P31645 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SLC6A4P31645 AF201337.1-201ENST00000520239 748 ntBASIC21.47■■□□□ 1.03
SLC6A4P31645 AC105036.2-201ENST00000569468 176 ntBASIC21.47■■□□□ 1.03
SLC6A4P31645 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A4P31645 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC6A4P31645 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A4P31645 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A4P31645 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC6A4P31645 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A4P31645 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A4P31645 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC6A4P31645 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SLC6A4P31645 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.46■■□□□ 1.03
SLC6A4P31645 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SLC6A4P31645 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A4P31645 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A4P31645 AC093787.1-201ENST00000450396 207 ntBASIC21.46■■□□□ 1.03
SLC6A4P31645 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.46■■□□□ 1.03
SLC6A4P31645 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A4P31645 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
SLC6A4P31645 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A4P31645 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SLC6A4P31645 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.45■■□□□ 1.03
SLC6A4P31645 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC6A4P31645 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.45■■□□□ 1.02
SLC6A4P31645 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SLC6A4P31645 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SLC6A4P31645 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.45■■□□□ 1.02
SLC6A4P31645 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A4P31645 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 AL355802.2-201ENST00000402069 882 ntBASIC21.44■■□□□ 1.02
SLC6A4P31645 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 AL162412.1-201ENST00000567129 965 ntBASIC21.44■■□□□ 1.02
SLC6A4P31645 AC079834.2-201ENST00000609776 1949 ntBASIC21.44■■□□□ 1.02
SLC6A4P31645 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.44■■□□□ 1.02
SLC6A4P31645 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.44■■□□□ 1.02
SLC6A4P31645 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SLC6A4P31645 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SLC6A4P31645 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A4P31645 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A4P31645 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A4P31645 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A4P31645 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SLC6A4P31645 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SLC6A4P31645 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.43■■□□□ 1.02
SLC6A4P31645 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.43■■□□□ 1.02
SLC6A4P31645 OR10C1-204ENST00000622521 1039 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms