Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SDHAP31040 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.66■□□□□ 0.58
SDHAP31040 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.66■□□□□ 0.58
SDHAP31040 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.66■□□□□ 0.58
SDHAP31040 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SDHAP31040 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SDHAP31040 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.66■□□□□ 0.58
SDHAP31040 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.66■□□□□ 0.58
SDHAP31040 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SDHAP31040 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.65■□□□□ 0.58
SDHAP31040 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.65■□□□□ 0.58
SDHAP31040 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SDHAP31040 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SDHAP31040 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.65■□□□□ 0.58
SDHAP31040 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.65■□□□□ 0.58
SDHAP31040 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.65■□□□□ 0.58
SDHAP31040 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SDHAP31040 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SDHAP31040 AP004607.4-201ENST00000530158 1459 ntBASIC18.65■□□□□ 0.58
SDHAP31040 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SDHAP31040 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SDHAP31040 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
SDHAP31040 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
SDHAP31040 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SDHAP31040 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SDHAP31040 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SDHAP31040 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SDHAP31040 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SDHAP31040 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SDHAP31040 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SDHAP31040 LINC01006-201ENST00000333319 2292 ntBASIC18.63■□□□□ 0.57
SDHAP31040 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SDHAP31040 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
SDHAP31040 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SDHAP31040 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHAP31040 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.63■□□□□ 0.57
SDHAP31040 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SDHAP31040 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHAP31040 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.63■□□□□ 0.57
SDHAP31040 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHAP31040 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SDHAP31040 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SDHAP31040 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
SDHAP31040 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SDHAP31040 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.62■□□□□ 0.57
SDHAP31040 AC073130.3-201ENST00000624389 2278 ntBASIC18.62■□□□□ 0.57
SDHAP31040 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 AC079140.4-201ENST00000507448 529 ntBASIC18.62■□□□□ 0.57
SDHAP31040 MIR6084-201ENST00000622012 110 ntBASIC18.62■□□□□ 0.57
SDHAP31040 KRT87P-202ENST00000534226 1464 ntBASIC18.62■□□□□ 0.57
SDHAP31040 AC061975.6-201ENST00000579045 1553 ntBASIC18.62■□□□□ 0.57
SDHAP31040 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SDHAP31040 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
SDHAP31040 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SDHAP31040 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SDHAP31040 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms