Protein–RNA interactions for Protein: P28331

NDUFS1, NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS1P28331 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NDUFS1P28331 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.24■□□□□ 0.83
NDUFS1P28331 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 AC068338.2-201ENST00000563278 1430 ntBASIC20.24■□□□□ 0.83
NDUFS1P28331 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.24■□□□□ 0.83
NDUFS1P28331 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.24■□□□□ 0.83
NDUFS1P28331 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFS1P28331 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.24■□□□□ 0.83
NDUFS1P28331 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NDUFS1P28331 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NDUFS1P28331 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NDUFS1P28331 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS1P28331 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NDUFS1P28331 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.23■□□□□ 0.83
NDUFS1P28331 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFS1P28331 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NDUFS1P28331 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
NDUFS1P28331 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.23■□□□□ 0.83
NDUFS1P28331 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.23■□□□□ 0.83
NDUFS1P28331 AC008694.1-202ENST00000636953 945 ntBASIC20.23■□□□□ 0.83
NDUFS1P28331 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFS1P28331 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 ID1-201ENST00000376105 1233 ntBASIC20.22■□□□□ 0.83
NDUFS1P28331 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NDUFS1P28331 CDV3P1-201ENST00000471403 739 ntBASIC20.22■□□□□ 0.83
NDUFS1P28331 AC133552.2-202ENST00000575694 574 ntBASIC20.22■□□□□ 0.83
NDUFS1P28331 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 AL121832.2-201ENST00000610979 668 ntBASIC20.22■□□□□ 0.83
NDUFS1P28331 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NDUFS1P28331 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFS1P28331 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NDUFS1P28331 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 NCF1B-203ENST00000435988 1254 ntBASIC20.21■□□□□ 0.83
NDUFS1P28331 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS1P28331 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NDUFS1P28331 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.21■□□□□ 0.83
NDUFS1P28331 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS1P28331 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS1P28331 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
NDUFS1P28331 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
NDUFS1P28331 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.2■□□□□ 0.82
NDUFS1P28331 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 AC091799.1-201ENST00000422823 811 ntBASIC20.2■□□□□ 0.82
NDUFS1P28331 CYP2T1P-201ENST00000432607 1285 ntBASIC20.2■□□□□ 0.82
NDUFS1P28331 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFS1P28331 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFS1P28331 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFS1P28331 OR10C1-204ENST00000622521 1039 ntBASIC20.2■□□□□ 0.82
NDUFS1P28331 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS1P28331 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms