Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN3P26045 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PTPN3P26045 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN3P26045 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPN3P26045 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN3P26045 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTPN3P26045 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PTPN3P26045 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN3P26045 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PTPN3P26045 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN3P26045 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 KRT16P2-201ENST00000414673 1423 ntBASIC21.25■□□□□ 0.99
PTPN3P26045 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PTPN3P26045 SLC7A5P2-201ENST00000553010 536 ntBASIC21.25■□□□□ 0.99
PTPN3P26045 MIR6821-201ENST00000617625 74 ntBASIC21.25■□□□□ 0.99
PTPN3P26045 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN3P26045 PLK5-205ENST00000642079 1969 ntBASIC21.25■□□□□ 0.99
PTPN3P26045 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.24■□□□□ 0.99
PTPN3P26045 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN3P26045 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PTPN3P26045 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPN3P26045 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PTPN3P26045 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN3P26045 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PTPN3P26045 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PTPN3P26045 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 AC087623.3-201ENST00000607047 1098 ntBASIC21.23■□□□□ 0.99
PTPN3P26045 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PTPN3P26045 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN3P26045 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
PTPN3P26045 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PTPN3P26045 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPN3P26045 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PTPN3P26045 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN3P26045 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PTPN3P26045 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PTPN3P26045 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN3P26045 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.22■□□□□ 0.99
PTPN3P26045 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPN3P26045 AC120498.10-201ENST00000621827 505 ntBASIC21.22■□□□□ 0.99
PTPN3P26045 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN3P26045 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PTPN3P26045 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
PTPN3P26045 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 AC121338.2-201ENST00000622535 1744 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN3P26045 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.21■□□□□ 0.99
PTPN3P26045 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN3P26045 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN3P26045 AC034268.1-201ENST00000441047 882 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPN3P26045 RARRES2P11-201ENST00000635158 484 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 PKD1P6-201ENST00000343738 4769 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN3P26045 AC019069.1-201ENST00000610008 1333 ntBASIC21.21■□□□□ 0.99
PTPN3P26045 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN3P26045 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PTPN3P26045 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
PTPN3P26045 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PTPN3P26045 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN3P26045 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms