Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NF1P21359 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NF1P21359 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 AC239809.2-201ENST00000415381 517 ntBASIC17.13■□□□□ 0.33
NF1P21359 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NF1P21359 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NF1P21359 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.13■□□□□ 0.33
NF1P21359 RBM17P2-201ENST00000616397 1405 ntBASIC17.13■□□□□ 0.33
NF1P21359 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.13■□□□□ 0.33
NF1P21359 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NF1P21359 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NF1P21359 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.12■□□□□ 0.33
NF1P21359 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.12■□□□□ 0.33
NF1P21359 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.12■□□□□ 0.33
NF1P21359 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.12■□□□□ 0.33
NF1P21359 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.12■□□□□ 0.33
NF1P21359 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NF1P21359 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
NF1P21359 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NF1P21359 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NF1P21359 BX664615.1-201ENST00000443558 458 ntBASIC17.11■□□□□ 0.33
NF1P21359 WWOX-216ENST00000569818 525 ntBASIC17.11■□□□□ 0.33
NF1P21359 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NF1P21359 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
NF1P21359 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.11■□□□□ 0.33
NF1P21359 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NF1P21359 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NF1P21359 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 AC113410.3-201ENST00000623366 203 ntBASIC17.11■□□□□ 0.33
NF1P21359 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.11■□□□□ 0.33
NF1P21359 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.1■□□□□ 0.33
NF1P21359 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.1■□□□□ 0.33
NF1P21359 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 MMP23A-201ENST00000234610 1017 ntBASIC17.1■□□□□ 0.33
NF1P21359 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NF1P21359 AP000347.1-202ENST00000435868 847 ntBASIC17.1■□□□□ 0.33
NF1P21359 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NF1P21359 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NF1P21359 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NF1P21359 KRT8P9-201ENST00000558927 1449 ntBASIC17.09■□□□□ 0.33
NF1P21359 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NF1P21359 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.09■□□□□ 0.33
NF1P21359 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NF1P21359 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NF1P21359 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NF1P21359 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NF1P21359 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NF1P21359 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NF1P21359 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NF1P21359 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NF1P21359 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.08■□□□□ 0.33
NF1P21359 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms