Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
COL11A2P13942 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.83■■□□□ 1.72
COL11A2P13942 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
COL11A2P13942 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.83■■□□□ 1.72
COL11A2P13942 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.72
COL11A2P13942 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
COL11A2P13942 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
COL11A2P13942 CYP21A1P-202ENST00000354927 1481 ntBASIC25.82■■□□□ 1.72
COL11A2P13942 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.82■■□□□ 1.72
COL11A2P13942 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.82■■□□□ 1.72
COL11A2P13942 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL11A2P13942 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.82■■□□□ 1.72
COL11A2P13942 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
COL11A2P13942 AC093323.1-202ENST00000635031 2045 ntBASIC25.82■■□□□ 1.72
COL11A2P13942 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.82■■□□□ 1.72
COL11A2P13942 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.82■■□□□ 1.72
COL11A2P13942 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.82■■□□□ 1.72
COL11A2P13942 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.82■■□□□ 1.72
COL11A2P13942 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL11A2P13942 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL11A2P13942 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.81■■□□□ 1.72
COL11A2P13942 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL11A2P13942 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.81■■□□□ 1.72
COL11A2P13942 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.81■■□□□ 1.72
COL11A2P13942 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL11A2P13942 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.81■■□□□ 1.72
COL11A2P13942 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL11A2P13942 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
COL11A2P13942 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.8■■□□□ 1.72
COL11A2P13942 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.8■■□□□ 1.72
COL11A2P13942 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.8■■□□□ 1.72
COL11A2P13942 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.8■■□□□ 1.72
COL11A2P13942 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL11A2P13942 AC124016.1-201ENST00000609552 612 ntBASIC25.8■■□□□ 1.72
COL11A2P13942 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.8■■□□□ 1.72
COL11A2P13942 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL11A2P13942 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
COL11A2P13942 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL11A2P13942 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.79■■□□□ 1.72
COL11A2P13942 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL11A2P13942 AC211429.1-201ENST00000415277 523 ntBASIC25.79■■□□□ 1.72
COL11A2P13942 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.79■■□□□ 1.72
COL11A2P13942 AL355075.4-201ENST00000554988 638 ntBASIC25.79■■□□□ 1.72
COL11A2P13942 AC233702.5-201ENST00000584107 538 ntBASIC25.79■■□□□ 1.72
COL11A2P13942 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.79■■□□□ 1.72
COL11A2P13942 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL11A2P13942 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.78■■□□□ 1.72
COL11A2P13942 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.78■■□□□ 1.72
COL11A2P13942 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
COL11A2P13942 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.78■■□□□ 1.72
COL11A2P13942 AC068473.5-201ENST00000616428 2072 ntBASIC25.77■■□□□ 1.72
COL11A2P13942 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.77■■□□□ 1.72
COL11A2P13942 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL11A2P13942 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC25.77■■□□□ 1.72
COL11A2P13942 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
COL11A2P13942 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
COL11A2P13942 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.77■■□□□ 1.72
COL11A2P13942 RPS2P55-201ENST00000397318 883 ntBASIC25.77■■□□□ 1.72
COL11A2P13942 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL11A2P13942 AC107956.1-201ENST00000494359 873 ntBASIC25.77■■□□□ 1.72
COL11A2P13942 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.76■■□□□ 1.71
COL11A2P13942 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.76■■□□□ 1.71
COL11A2P13942 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
COL11A2P13942 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.76■■□□□ 1.71
COL11A2P13942 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.76■■□□□ 1.71
COL11A2P13942 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
COL11A2P13942 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.76■■□□□ 1.71
COL11A2P13942 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
COL11A2P13942 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms