Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDH1P12830 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CDH1P12830 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDH1P12830 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH1P12830 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH1P12830 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH1P12830 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH1P12830 KRT18P61-201ENST00000585825 1298 ntBASIC20.29■□□□□ 0.84
CDH1P12830 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CDH1P12830 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH1P12830 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH1P12830 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH1P12830 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH1P12830 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH1P12830 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
CDH1P12830 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH1P12830 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH1P12830 MIR935-201ENST00000401179 91 ntBASIC20.28■□□□□ 0.84
CDH1P12830 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH1P12830 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.28■□□□□ 0.84
CDH1P12830 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH1P12830 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH1P12830 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH1P12830 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH1P12830 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 AF106564.1-201ENST00000607058 2553 ntBASIC20.28■□□□□ 0.84
CDH1P12830 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH1P12830 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH1P12830 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH1P12830 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH1P12830 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH1P12830 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH1P12830 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.27■□□□□ 0.84
CDH1P12830 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH1P12830 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.27■□□□□ 0.84
CDH1P12830 AC138907.5-202ENST00000569484 235 ntBASIC20.27■□□□□ 0.84
CDH1P12830 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.27■□□□□ 0.84
CDH1P12830 NTF6G-201ENST00000591094 616 ntBASIC20.27■□□□□ 0.84
CDH1P12830 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDH1P12830 RNF165-205ENST00000588679 2904 ntBASIC20.26■□□□□ 0.83
CDH1P12830 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.26■□□□□ 0.83
CDH1P12830 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH1P12830 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH1P12830 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH1P12830 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.26■□□□□ 0.83
CDH1P12830 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CDH1P12830 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CDH1P12830 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
CDH1P12830 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH1P12830 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDH1P12830 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
CDH1P12830 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH1P12830 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH1P12830 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH1P12830 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH1P12830 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH1P12830 AC061975.6-201ENST00000579045 1553 ntBASIC20.25■□□□□ 0.83
CDH1P12830 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH1P12830 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH1P12830 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH1P12830 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH1P12830 LINC01521-201ENST00000504184 1943 ntBASIC20.24■□□□□ 0.83
CDH1P12830 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH1P12830 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.24■□□□□ 0.83
CDH1P12830 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH1P12830 AC010141.2-201ENST00000452426 721 ntBASIC20.24■□□□□ 0.83
CDH1P12830 AP001160.3-201ENST00000601484 763 ntBASIC20.24■□□□□ 0.83
CDH1P12830 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDH1P12830 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.24■□□□□ 0.83
CDH1P12830 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms