Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL4AP11441 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.23■□□□□ 0.67
UBL4AP11441 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL4AP11441 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL4AP11441 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.23■□□□□ 0.67
UBL4AP11441 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL4AP11441 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
UBL4AP11441 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBL4AP11441 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.22■□□□□ 0.67
UBL4AP11441 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.22■□□□□ 0.67
UBL4AP11441 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.22■□□□□ 0.67
UBL4AP11441 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.22■□□□□ 0.67
UBL4AP11441 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBL4AP11441 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.22■□□□□ 0.67
UBL4AP11441 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
UBL4AP11441 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
UBL4AP11441 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL4AP11441 AC005229.4-201ENST00000610085 2198 ntBASIC19.22■□□□□ 0.67
UBL4AP11441 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
UBL4AP11441 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBL4AP11441 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UBL4AP11441 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBL4AP11441 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
UBL4AP11441 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.21■□□□□ 0.67
UBL4AP11441 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBL4AP11441 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 AC138907.5-202ENST00000569484 235 ntBASIC19.21■□□□□ 0.67
UBL4AP11441 AC008175.2-201ENST00000612840 297 ntBASIC19.21■□□□□ 0.67
UBL4AP11441 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL4AP11441 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UBL4AP11441 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
UBL4AP11441 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.2■□□□□ 0.66
UBL4AP11441 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.2■□□□□ 0.66
UBL4AP11441 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.2■□□□□ 0.66
UBL4AP11441 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.2■□□□□ 0.66
UBL4AP11441 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.2■□□□□ 0.66
UBL4AP11441 AC104187.1-201ENST00000607510 612 ntBASIC19.2■□□□□ 0.66
UBL4AP11441 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
UBL4AP11441 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL4AP11441 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL4AP11441 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.19■□□□□ 0.66
UBL4AP11441 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
UBL4AP11441 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.19■□□□□ 0.66
UBL4AP11441 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.19■□□□□ 0.66
UBL4AP11441 POU5F1P4-201ENST00000413175 1085 ntBASIC19.19■□□□□ 0.66
UBL4AP11441 AC097381.1-201ENST00000429019 1296 ntBASIC19.19■□□□□ 0.66
UBL4AP11441 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.19■□□□□ 0.66
UBL4AP11441 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.19■□□□□ 0.66
UBL4AP11441 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.19■□□□□ 0.66
UBL4AP11441 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBL4AP11441 AC061975.6-201ENST00000579045 1553 ntBASIC19.19■□□□□ 0.66
UBL4AP11441 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBL4AP11441 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBL4AP11441 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBL4AP11441 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms