Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RARAP10276 AC053503.5-201ENST00000601508 636 ntBASIC21.87■■□□□ 1.09
RARAP10276 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.87■■□□□ 1.09
RARAP10276 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.87■■□□□ 1.09
RARAP10276 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RARAP10276 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RARAP10276 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.86■■□□□ 1.09
RARAP10276 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARAP10276 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RARAP10276 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARAP10276 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RARAP10276 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.86■■□□□ 1.09
RARAP10276 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RARAP10276 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.86■■□□□ 1.09
RARAP10276 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.86■■□□□ 1.09
RARAP10276 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.86■■□□□ 1.09
RARAP10276 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.85■■□□□ 1.09
RARAP10276 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARAP10276 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.85■■□□□ 1.09
RARAP10276 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARAP10276 AC079140.4-201ENST00000507448 529 ntBASIC21.85■■□□□ 1.09
RARAP10276 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARAP10276 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARAP10276 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RARAP10276 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.85■■□□□ 1.09
RARAP10276 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
RARAP10276 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RARAP10276 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARAP10276 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RARAP10276 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARAP10276 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RARAP10276 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.84■■□□□ 1.09
RARAP10276 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RARAP10276 LINC02228-203ENST00000641970 1355 ntBASIC21.84■■□□□ 1.09
RARAP10276 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
RARAP10276 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RARAP10276 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RARAP10276 PLK5-205ENST00000642079 1969 ntBASIC21.83■■□□□ 1.09
RARAP10276 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RARAP10276 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.83■■□□□ 1.09
RARAP10276 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RARAP10276 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.83■■□□□ 1.09
RARAP10276 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.83■■□□□ 1.09
RARAP10276 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RARAP10276 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
RARAP10276 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RARAP10276 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RARAP10276 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.82■■□□□ 1.08
RARAP10276 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 AC123595.1-201ENST00000440769 1046 ntBASIC21.82■■□□□ 1.08
RARAP10276 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.82■■□□□ 1.08
RARAP10276 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.82■■□□□ 1.08
RARAP10276 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 KRT87P-202ENST00000534226 1464 ntBASIC21.82■■□□□ 1.08
RARAP10276 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RARAP10276 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.81■■□□□ 1.08
RARAP10276 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.81■■□□□ 1.08
RARAP10276 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RARAP10276 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.81■■□□□ 1.08
RARAP10276 YBX1P1-201ENST00000445822 960 ntBASIC21.81■■□□□ 1.08
RARAP10276 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.81■■□□□ 1.08
RARAP10276 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.81■■□□□ 1.08
RARAP10276 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.81■■□□□ 1.08
RARAP10276 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RARAP10276 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.8■■□□□ 1.08
RARAP10276 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RARAP10276 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RARAP10276 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RARAP10276 AC006128.1-201ENST00000624704 1661 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms