Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 GCK-205ENST00000437084 1385 ntTSL 5 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 Z99916.2-201ENST00000604037 246 ntBASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CSB-PGBD3P0DP91 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CSB-PGBD3P0DP91 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.76■■■□□ 2.04
CSB-PGBD3P0DP91 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 ECEL1P3-201ENST00000427961 737 ntBASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 SNORA78-201ENST00000459373 127 ntBASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.76■■■□□ 2.03
CSB-PGBD3P0DP91 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AC026471.6-201ENST00000622954 1905 ntBASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 SLC29A4P2-201ENST00000504749 1089 ntBASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AC069544.1-201ENST00000609399 999 ntBASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 AC073912.3-201ENST00000624414 853 ntBASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CSB-PGBD3P0DP91 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 AC007322.3-201ENST00000426526 701 ntBASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
CSB-PGBD3P0DP91 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.73■■■□□ 2.03
CSB-PGBD3P0DP91 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.73■■■□□ 2.03
CSB-PGBD3P0DP91 HES2-205ENST00000487437 968 ntTSL 3 BASIC27.73■■■□□ 2.03
CSB-PGBD3P0DP91 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
CSB-PGBD3P0DP91 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CSB-PGBD3P0DP91 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 CRK-204ENST00000574295 1391 ntTSL 5 BASIC27.72■■■□□ 2.03
CSB-PGBD3P0DP91 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC27.71■■■□□ 2.03
CSB-PGBD3P0DP91 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms