Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
FREM3P0C091 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FREM3P0C091 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FREM3P0C091 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FREM3P0C091 AC120498.10-201ENST00000621827 505 ntBASIC18.98■□□□□ 0.63
FREM3P0C091 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FREM3P0C091 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FREM3P0C091 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.97■□□□□ 0.63
FREM3P0C091 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 AC016405.3-201ENST00000607710 860 ntBASIC18.97■□□□□ 0.63
FREM3P0C091 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.97■□□□□ 0.63
FREM3P0C091 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FREM3P0C091 CYP2T1P-201ENST00000432607 1285 ntBASIC18.97■□□□□ 0.63
FREM3P0C091 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.97■□□□□ 0.63
FREM3P0C091 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.97■□□□□ 0.63
FREM3P0C091 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.97■□□□□ 0.63
FREM3P0C091 AL109923.1-201ENST00000618799 583 ntBASIC18.97■□□□□ 0.63
FREM3P0C091 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FREM3P0C091 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
FREM3P0C091 AC007322.4-201ENST00000509611 723 ntBASIC18.96■□□□□ 0.63
FREM3P0C091 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.96■□□□□ 0.63
FREM3P0C091 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.96■□□□□ 0.63
FREM3P0C091 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.96■□□□□ 0.63
FREM3P0C091 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.96■□□□□ 0.63
FREM3P0C091 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FREM3P0C091 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.96■□□□□ 0.63
FREM3P0C091 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.62
FREM3P0C091 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.95■□□□□ 0.62
FREM3P0C091 AL355802.2-201ENST00000402069 882 ntBASIC18.95■□□□□ 0.62
FREM3P0C091 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.95■□□□□ 0.62
FREM3P0C091 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.95■□□□□ 0.62
FREM3P0C091 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FREM3P0C091 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.95■□□□□ 0.62
FREM3P0C091 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 Z98882.1-201ENST00000622160 2253 ntBASIC18.95■□□□□ 0.62
FREM3P0C091 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FREM3P0C091 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 SLC29A4P1-201ENST00000398760 971 ntBASIC18.95■□□□□ 0.62
FREM3P0C091 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FREM3P0C091 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.95■□□□□ 0.62
FREM3P0C091 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FREM3P0C091 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FREM3P0C091 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
FREM3P0C091 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 AC007322.3-201ENST00000426526 701 ntBASIC18.94■□□□□ 0.62
FREM3P0C091 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 AC142086.2-201ENST00000569753 217 ntBASIC18.94■□□□□ 0.62
FREM3P0C091 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.94■□□□□ 0.62
FREM3P0C091 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
FREM3P0C091 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.94■□□□□ 0.62
FREM3P0C091 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.94■□□□□ 0.62
FREM3P0C091 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
FREM3P0C091 MKRN4P-201ENST00000444706 1521 ntBASIC18.94■□□□□ 0.62
FREM3P0C091 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.94■□□□□ 0.62
FREM3P0C091 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FREM3P0C091 AC244015.2-201ENST00000616358 1861 ntBASIC18.94■□□□□ 0.62
FREM3P0C091 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FREM3P0C091 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
FREM3P0C091 AF106564.1-201ENST00000607058 2553 ntBASIC18.93■□□□□ 0.62
FREM3P0C091 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.93■□□□□ 0.62
FREM3P0C091 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FREM3P0C091 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.93■□□□□ 0.62
FREM3P0C091 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
FREM3P0C091 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
FREM3P0C091 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.92■□□□□ 0.62
FREM3P0C091 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FREM3P0C091 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms