Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.72■■□□□ 1.87
SNRPA1P09661 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 GUSBP5-202ENST00000510805 1989 ntBASIC26.72■■□□□ 1.87
SNRPA1P09661 MCRIP2P1-201ENST00000394346 511 ntBASIC26.72■■□□□ 1.87
SNRPA1P09661 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SNRPA1P09661 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
SNRPA1P09661 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.72■■□□□ 1.87
SNRPA1P09661 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.72■■□□□ 1.87
SNRPA1P09661 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SNRPA1P09661 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRPA1P09661 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SNRPA1P09661 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SNRPA1P09661 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.71■■□□□ 1.87
SNRPA1P09661 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 AC007322.3-201ENST00000426526 701 ntBASIC26.71■■□□□ 1.87
SNRPA1P09661 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SNRPA1P09661 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.71■■□□□ 1.87
SNRPA1P09661 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SNRPA1P09661 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SNRPA1P09661 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.7■■□□□ 1.86
SNRPA1P09661 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.7■■□□□ 1.86
SNRPA1P09661 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
SNRPA1P09661 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.7■■□□□ 1.86
SNRPA1P09661 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNRPA1P09661 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.69■■□□□ 1.86
SNRPA1P09661 AC233723.2-201ENST00000623798 2106 ntBASIC26.69■■□□□ 1.86
SNRPA1P09661 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNRPA1P09661 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SNRPA1P09661 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNRPA1P09661 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRPA1P09661 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.69■■□□□ 1.86
SNRPA1P09661 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNRPA1P09661 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRPA1P09661 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRPA1P09661 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRPA1P09661 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.69■■□□□ 1.86
SNRPA1P09661 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNRPA1P09661 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.69■■□□□ 1.86
SNRPA1P09661 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.69■■□□□ 1.86
SNRPA1P09661 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNRPA1P09661 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNRPA1P09661 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
SNRPA1P09661 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNRPA1P09661 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNRPA1P09661 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.68■■□□□ 1.86
SNRPA1P09661 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.68■■□□□ 1.86
SNRPA1P09661 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.68■■□□□ 1.86
SNRPA1P09661 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.68■■□□□ 1.86
SNRPA1P09661 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.68■■□□□ 1.86
SNRPA1P09661 AL589743.5-201ENST00000616611 1050 ntBASIC26.68■■□□□ 1.86
SNRPA1P09661 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNRPA1P09661 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNRPA1P09661 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.68■■□□□ 1.86
SNRPA1P09661 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.68■■□□□ 1.86
SNRPA1P09661 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.67■■□□□ 1.86
SNRPA1P09661 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 UNC93B5-201ENST00000530315 699 ntBASIC26.67■■□□□ 1.86
SNRPA1P09661 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.67■■□□□ 1.86
SNRPA1P09661 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNRPA1P09661 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.66■■□□□ 1.86
SNRPA1P09661 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.66■■□□□ 1.86
SNRPA1P09661 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRPA1P09661 KRT18P68-201ENST00000392293 1000 ntBASIC26.66■■□□□ 1.86
SNRPA1P09661 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
SNRPA1P09661 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.66■■□□□ 1.86
SNRPA1P09661 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRPA1P09661 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRPA1P09661 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNRPA1P09661 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNRPA1P09661 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNRPA1P09661 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNRPA1P09661 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
SNRPA1P09661 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.65■■□□□ 1.86
SNRPA1P09661 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNRPA1P09661 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms