Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RB1P06400 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.22■■□□□ 1.15
RB1P06400 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RB1P06400 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.22■■□□□ 1.15
RB1P06400 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.22■■□□□ 1.15
RB1P06400 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
RB1P06400 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.22■■□□□ 1.15
RB1P06400 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
RB1P06400 POM121L13P-201ENST00000422362 380 ntBASIC22.21■■□□□ 1.15
RB1P06400 AC007322.3-201ENST00000426526 701 ntBASIC22.21■■□□□ 1.15
RB1P06400 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
RB1P06400 AC233263.1-201ENST00000578059 224 ntBASIC22.21■■□□□ 1.15
RB1P06400 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.21■■□□□ 1.15
RB1P06400 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.21■■□□□ 1.15
RB1P06400 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RB1P06400 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.21■■□□□ 1.15
RB1P06400 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.2■■□□□ 1.14
RB1P06400 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.2■■□□□ 1.14
RB1P06400 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 LINC01023-201ENST00000606054 436 ntBASIC22.2■■□□□ 1.14
RB1P06400 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RB1P06400 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.2■■□□□ 1.14
RB1P06400 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.2■■□□□ 1.14
RB1P06400 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RB1P06400 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RB1P06400 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 MIR1224-201ENST00000408193 85 ntBASIC22.19■■□□□ 1.14
RB1P06400 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.19■■□□□ 1.14
RB1P06400 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.19■■□□□ 1.14
RB1P06400 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.19■■□□□ 1.14
RB1P06400 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.19■■□□□ 1.14
RB1P06400 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RB1P06400 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RB1P06400 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.18■■□□□ 1.14
RB1P06400 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RB1P06400 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.18■■□□□ 1.14
RB1P06400 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RB1P06400 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RB1P06400 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RB1P06400 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.17■■□□□ 1.14
RB1P06400 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RB1P06400 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RB1P06400 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RB1P06400 AC012618.2-201ENST00000428058 849 ntBASIC22.17■■□□□ 1.14
RB1P06400 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RB1P06400 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.17■■□□□ 1.14
RB1P06400 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.17■■□□□ 1.14
RB1P06400 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.17■■□□□ 1.14
RB1P06400 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
RB1P06400 AC092053.2-201ENST00000640557 1818 ntBASIC22.17■■□□□ 1.14
RB1P06400 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.16■■□□□ 1.14
RB1P06400 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.16■■□□□ 1.14
RB1P06400 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.16■■□□□ 1.14
RB1P06400 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.16■■□□□ 1.14
RB1P06400 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.16■■□□□ 1.14
RB1P06400 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.16■■□□□ 1.14
RB1P06400 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RB1P06400 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RB1P06400 KRT17P2-201ENST00000300992 1314 ntBASIC22.15■■□□□ 1.14
RB1P06400 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RB1P06400 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RB1P06400 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RB1P06400 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms