Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
OPN1SWP03999 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
OPN1SWP03999 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
OPN1SWP03999 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
OPN1SWP03999 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.44■□□□□ 0.7
OPN1SWP03999 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
OPN1SWP03999 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
OPN1SWP03999 AC009237.3-201ENST00000393279 1427 ntBASIC19.44■□□□□ 0.7
OPN1SWP03999 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
OPN1SWP03999 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.44■□□□□ 0.7
OPN1SWP03999 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 AC099791.1-201ENST00000416440 715 ntBASIC19.44■□□□□ 0.7
OPN1SWP03999 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.44■□□□□ 0.7
OPN1SWP03999 AC105233.4-201ENST00000642045 216 ntBASIC19.44■□□□□ 0.7
OPN1SWP03999 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 PCDHAC2-203ENST00000615316 3011 ntBASIC19.44■□□□□ 0.7
OPN1SWP03999 TSPY26P-201ENST00000476365 1326 ntBASIC19.44■□□□□ 0.7
OPN1SWP03999 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
OPN1SWP03999 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.44■□□□□ 0.7
OPN1SWP03999 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.43■□□□□ 0.7
OPN1SWP03999 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
OPN1SWP03999 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.43■□□□□ 0.7
OPN1SWP03999 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.43■□□□□ 0.7
OPN1SWP03999 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.43■□□□□ 0.7
OPN1SWP03999 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
OPN1SWP03999 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
OPN1SWP03999 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
OPN1SWP03999 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
OPN1SWP03999 AP005212.1-201ENST00000581547 1997 ntBASIC19.43■□□□□ 0.7
OPN1SWP03999 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
OPN1SWP03999 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
OPN1SWP03999 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.42■□□□□ 0.7
OPN1SWP03999 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
OPN1SWP03999 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.42■□□□□ 0.7
OPN1SWP03999 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.42■□□□□ 0.7
OPN1SWP03999 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.42■□□□□ 0.7
OPN1SWP03999 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.42■□□□□ 0.7
OPN1SWP03999 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
OPN1SWP03999 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.42■□□□□ 0.7
OPN1SWP03999 AC005224.4-201ENST00000583262 1652 ntBASIC19.42■□□□□ 0.7
OPN1SWP03999 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 AC121338.2-201ENST00000622535 1744 ntBASIC19.42■□□□□ 0.7
OPN1SWP03999 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
OPN1SWP03999 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.42■□□□□ 0.7
OPN1SWP03999 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPN1SWP03999 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
OPN1SWP03999 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.41■□□□□ 0.7
OPN1SWP03999 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
OPN1SWP03999 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPN1SWP03999 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
OPN1SWP03999 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
OPN1SWP03999 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
OPN1SWP03999 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
OPN1SWP03999 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
OPN1SWP03999 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.4■□□□□ 0.7
OPN1SWP03999 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 AC096631.2-201ENST00000436136 790 ntBASIC19.4■□□□□ 0.7
OPN1SWP03999 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.4■□□□□ 0.7
OPN1SWP03999 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
OPN1SWP03999 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.4■□□□□ 0.7
OPN1SWP03999 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
OPN1SWP03999 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms