Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.65■□□□□ 0.9
SOD1P00441 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD1P00441 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD1P00441 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
SOD1P00441 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.65■□□□□ 0.9
SOD1P00441 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.65■□□□□ 0.9
SOD1P00441 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOD1P00441 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SOD1P00441 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SOD1P00441 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SOD1P00441 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SOD1P00441 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SOD1P00441 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.64■□□□□ 0.9
SOD1P00441 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SOD1P00441 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SOD1P00441 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 GUSBP6-202ENST00000438529 1198 ntBASIC20.64■□□□□ 0.89
SOD1P00441 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 AC104771.1-201ENST00000603335 964 ntBASIC20.64■□□□□ 0.89
SOD1P00441 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.64■□□□□ 0.89
SOD1P00441 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SOD1P00441 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.63■□□□□ 0.89
SOD1P00441 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SOD1P00441 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SOD1P00441 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.63■□□□□ 0.89
SOD1P00441 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SOD1P00441 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.63■□□□□ 0.89
SOD1P00441 AC133552.2-202ENST00000575694 574 ntBASIC20.63■□□□□ 0.89
SOD1P00441 AC016405.3-201ENST00000607710 860 ntBASIC20.63■□□□□ 0.89
SOD1P00441 AL121832.2-201ENST00000610979 668 ntBASIC20.63■□□□□ 0.89
SOD1P00441 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SOD1P00441 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.63■□□□□ 0.89
SOD1P00441 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOD1P00441 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SOD1P00441 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.62■□□□□ 0.89
SOD1P00441 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SOD1P00441 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 GPX1P1-201ENST00000388829 606 ntBASIC20.62■□□□□ 0.89
SOD1P00441 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.62■□□□□ 0.89
SOD1P00441 AC083906.2-201ENST00000511578 360 ntBASIC20.62■□□□□ 0.89
SOD1P00441 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.62■□□□□ 0.89
SOD1P00441 AL162412.1-201ENST00000567129 965 ntBASIC20.62■□□□□ 0.89
SOD1P00441 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SOD1P00441 AL591742.1-201ENST00000604433 565 ntBASIC20.62■□□□□ 0.89
SOD1P00441 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOD1P00441 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SOD1P00441 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
SOD1P00441 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SOD1P00441 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.61■□□□□ 0.89
SOD1P00441 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.61■□□□□ 0.89
SOD1P00441 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
SOD1P00441 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SOD1P00441 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOD1P00441 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.61■□□□□ 0.89
SOD1P00441 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SOD1P00441 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.6■□□□□ 0.89
SOD1P00441 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SOD1P00441 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.6■□□□□ 0.89
SOD1P00441 TSPY6P-201ENST00000448518 926 ntBASIC20.6■□□□□ 0.89
SOD1P00441 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SOD1P00441 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.6■□□□□ 0.89
SOD1P00441 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.6■□□□□ 0.89
SOD1P00441 AL109923.1-201ENST00000618799 583 ntBASIC20.6■□□□□ 0.89
SOD1P00441 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOD1P00441 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.6■□□□□ 0.89
SOD1P00441 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
SOD1P00441 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms