Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CBX6O95503 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.68■□□□□ 0.9
CBX6O95503 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.68■□□□□ 0.9
CBX6O95503 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CBX6O95503 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CBX6O95503 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CBX6O95503 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
CBX6O95503 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CBX6O95503 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.66■□□□□ 0.9
CBX6O95503 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.66■□□□□ 0.9
CBX6O95503 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.66■□□□□ 0.9
CBX6O95503 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CBX6O95503 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CBX6O95503 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX6O95503 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CBX6O95503 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX6O95503 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.65■□□□□ 0.9
CBX6O95503 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.65■□□□□ 0.9
CBX6O95503 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CBX6O95503 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CBX6O95503 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CBX6O95503 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CBX6O95503 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CBX6O95503 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CBX6O95503 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CBX6O95503 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
CBX6O95503 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
CBX6O95503 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 RARRES2P11-201ENST00000635158 484 ntBASIC20.64■□□□□ 0.89
CBX6O95503 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CBX6O95503 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.64■□□□□ 0.89
CBX6O95503 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.64■□□□□ 0.89
CBX6O95503 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CBX6O95503 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CBX6O95503 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CBX6O95503 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CBX6O95503 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX6O95503 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.63■□□□□ 0.89
CBX6O95503 AC090192.1-201ENST00000517740 490 ntBASIC20.63■□□□□ 0.89
CBX6O95503 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
CBX6O95503 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX6O95503 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CBX6O95503 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
CBX6O95503 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.63■□□□□ 0.89
CBX6O95503 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CBX6O95503 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBX6O95503 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms