Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.92■□□□□ 0.94
VAPBO95292 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.92■□□□□ 0.94
VAPBO95292 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.92■□□□□ 0.94
VAPBO95292 PLK5-205ENST00000642079 1969 ntBASIC20.92■□□□□ 0.94
VAPBO95292 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.92■□□□□ 0.94
VAPBO95292 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.92■□□□□ 0.94
VAPBO95292 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VAPBO95292 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VAPBO95292 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VAPBO95292 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VAPBO95292 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VAPBO95292 AL157384.1-201ENST00000445995 2473 ntBASIC20.91■□□□□ 0.94
VAPBO95292 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.91■□□□□ 0.94
VAPBO95292 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.91■□□□□ 0.94
VAPBO95292 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VAPBO95292 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.91■□□□□ 0.94
VAPBO95292 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VAPBO95292 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VAPBO95292 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VAPBO95292 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VAPBO95292 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.9■□□□□ 0.94
VAPBO95292 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
VAPBO95292 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VAPBO95292 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
VAPBO95292 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.9■□□□□ 0.94
VAPBO95292 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.9■□□□□ 0.94
VAPBO95292 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
VAPBO95292 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
VAPBO95292 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.89■□□□□ 0.94
VAPBO95292 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VAPBO95292 AP004607.4-201ENST00000530158 1459 ntBASIC20.89■□□□□ 0.94
VAPBO95292 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VAPBO95292 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VAPBO95292 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.89■□□□□ 0.93
VAPBO95292 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VAPBO95292 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.89■□□□□ 0.93
VAPBO95292 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VAPBO95292 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
VAPBO95292 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VAPBO95292 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VAPBO95292 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.89■□□□□ 0.93
VAPBO95292 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.88■□□□□ 0.93
VAPBO95292 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 ZNRF2P3-201ENST00000424200 374 ntBASIC20.88■□□□□ 0.93
VAPBO95292 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.88■□□□□ 0.93
VAPBO95292 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.88■□□□□ 0.93
VAPBO95292 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.88■□□□□ 0.93
VAPBO95292 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.88■□□□□ 0.93
VAPBO95292 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VAPBO95292 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VAPBO95292 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.88■□□□□ 0.93
VAPBO95292 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VAPBO95292 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 AC006128.1-201ENST00000624704 1661 ntBASIC20.87■□□□□ 0.93
VAPBO95292 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.87■□□□□ 0.93
VAPBO95292 AC123595.1-201ENST00000440769 1046 ntBASIC20.87■□□□□ 0.93
VAPBO95292 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.87■□□□□ 0.93
VAPBO95292 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VAPBO95292 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VAPBO95292 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VAPBO95292 AC121338.2-201ENST00000622535 1744 ntBASIC20.87■□□□□ 0.93
VAPBO95292 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
VAPBO95292 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.86■□□□□ 0.93
VAPBO95292 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VAPBO95292 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VAPBO95292 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.86■□□□□ 0.93
VAPBO95292 YBX1P1-201ENST00000445822 960 ntBASIC20.86■□□□□ 0.93
VAPBO95292 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.86■□□□□ 0.93
VAPBO95292 AC008175.2-201ENST00000612840 297 ntBASIC20.86■□□□□ 0.93
VAPBO95292 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VAPBO95292 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms