Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.99■■□□□ 1.59
MBD4O95243 AC091799.1-201ENST00000422823 811 ntBASIC24.99■■□□□ 1.59
MBD4O95243 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.99■■□□□ 1.59
MBD4O95243 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.99■■□□□ 1.59
MBD4O95243 AC083906.2-201ENST00000511578 360 ntBASIC24.99■■□□□ 1.59
MBD4O95243 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
MBD4O95243 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MBD4O95243 AL121832.2-201ENST00000610979 668 ntBASIC24.99■■□□□ 1.59
MBD4O95243 AL109923.1-201ENST00000618799 583 ntBASIC24.99■■□□□ 1.59
MBD4O95243 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.99■■□□□ 1.59
MBD4O95243 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MBD4O95243 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
MBD4O95243 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MBD4O95243 Z98882.1-201ENST00000622160 2253 ntBASIC24.98■■□□□ 1.59
MBD4O95243 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.98■■□□□ 1.59
MBD4O95243 AC079834.2-201ENST00000609776 1949 ntBASIC24.98■■□□□ 1.59
MBD4O95243 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MBD4O95243 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MBD4O95243 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.98■■□□□ 1.59
MBD4O95243 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
MBD4O95243 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MBD4O95243 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.98■■□□□ 1.59
MBD4O95243 AC016405.3-201ENST00000607710 860 ntBASIC24.98■■□□□ 1.59
MBD4O95243 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.98■■□□□ 1.59
MBD4O95243 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.98■■□□□ 1.59
MBD4O95243 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MBD4O95243 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.98■■□□□ 1.59
MBD4O95243 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.98■■□□□ 1.59
MBD4O95243 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
MBD4O95243 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.97■■□□□ 1.59
MBD4O95243 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MBD4O95243 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
MBD4O95243 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.97■■□□□ 1.59
MBD4O95243 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MBD4O95243 AL591742.1-201ENST00000604433 565 ntBASIC24.97■■□□□ 1.59
MBD4O95243 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MBD4O95243 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.97■■□□□ 1.59
MBD4O95243 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.96■■□□□ 1.59
MBD4O95243 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
MBD4O95243 GUSBP6-202ENST00000438529 1198 ntBASIC24.96■■□□□ 1.59
MBD4O95243 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
MBD4O95243 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.96■■□□□ 1.59
MBD4O95243 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.96■■□□□ 1.59
MBD4O95243 AC133552.2-202ENST00000575694 574 ntBASIC24.96■■□□□ 1.59
MBD4O95243 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
MBD4O95243 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MBD4O95243 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MBD4O95243 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MBD4O95243 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.96■■□□□ 1.59
MBD4O95243 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
MBD4O95243 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
MBD4O95243 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
MBD4O95243 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MBD4O95243 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.95■■□□□ 1.58
MBD4O95243 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.95■■□□□ 1.58
MBD4O95243 AC105036.2-201ENST00000569468 176 ntBASIC24.95■■□□□ 1.58
MBD4O95243 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.95■■□□□ 1.58
MBD4O95243 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.95■■□□□ 1.58
MBD4O95243 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.95■■□□□ 1.58
MBD4O95243 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MBD4O95243 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
MBD4O95243 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.95■■□□□ 1.58
MBD4O95243 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.95■■□□□ 1.58
MBD4O95243 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
MBD4O95243 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.95■■□□□ 1.58
MBD4O95243 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
MBD4O95243 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
MBD4O95243 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
MBD4O95243 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.94■■□□□ 1.58
MBD4O95243 TSPY6P-201ENST00000448518 926 ntBASIC24.94■■□□□ 1.58
MBD4O95243 AF201337.1-201ENST00000520239 748 ntBASIC24.94■■□□□ 1.58
MBD4O95243 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.94■■□□□ 1.58
MBD4O95243 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
MBD4O95243 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
MBD4O95243 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MBD4O95243 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.93■■□□□ 1.58
MBD4O95243 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
MBD4O95243 AC093787.1-201ENST00000450396 207 ntBASIC24.93■■□□□ 1.58
MBD4O95243 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
MBD4O95243 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
MBD4O95243 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.92■■□□□ 1.58
MBD4O95243 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
MBD4O95243 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
MBD4O95243 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.92■■□□□ 1.58
MBD4O95243 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
MBD4O95243 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
MBD4O95243 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms