Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.34■□□□□ 0.53
ALX3O95076 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.34■□□□□ 0.53
ALX3O95076 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.34■□□□□ 0.53
ALX3O95076 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ALX3O95076 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALX3O95076 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALX3O95076 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.33■□□□□ 0.53
ALX3O95076 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALX3O95076 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALX3O95076 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ALX3O95076 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.33■□□□□ 0.52
ALX3O95076 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ALX3O95076 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALX3O95076 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.33■□□□□ 0.52
ALX3O95076 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.33■□□□□ 0.52
ALX3O95076 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALX3O95076 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ALX3O95076 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALX3O95076 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALX3O95076 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
ALX3O95076 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALX3O95076 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.32■□□□□ 0.52
ALX3O95076 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
ALX3O95076 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ALX3O95076 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALX3O95076 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
ALX3O95076 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX3O95076 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.32■□□□□ 0.52
ALX3O95076 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.32■□□□□ 0.52
ALX3O95076 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ALX3O95076 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX3O95076 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ALX3O95076 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALX3O95076 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ALX3O95076 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 AC018445.3-201ENST00000624177 1945 ntBASIC18.31■□□□□ 0.52
ALX3O95076 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.31■□□□□ 0.52
ALX3O95076 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ALX3O95076 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.31■□□□□ 0.52
ALX3O95076 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.31■□□□□ 0.52
ALX3O95076 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ALX3O95076 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALX3O95076 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.3■□□□□ 0.52
ALX3O95076 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 BX323043.1-201ENST00000641006 1765 ntBASIC18.3■□□□□ 0.52
ALX3O95076 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.3■□□□□ 0.52
ALX3O95076 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.3■□□□□ 0.52
ALX3O95076 MIR4466-201ENST00000606121 54 ntBASIC18.3■□□□□ 0.52
ALX3O95076 AP004607.7-201ENST00000527152 1677 ntBASIC18.3■□□□□ 0.52
ALX3O95076 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALX3O95076 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ALX3O95076 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.29■□□□□ 0.52
ALX3O95076 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 AL139246.5-201ENST00000606645 996 ntBASIC18.29■□□□□ 0.52
ALX3O95076 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ALX3O95076 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ALX3O95076 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.29■□□□□ 0.52
ALX3O95076 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALX3O95076 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ALX3O95076 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms