Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
GPC4O75487 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GPC4O75487 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 KRT18P14-201ENST00000534205 1250 ntBASIC20.81■□□□□ 0.92
GPC4O75487 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
GPC4O75487 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.8■□□□□ 0.92
GPC4O75487 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GPC4O75487 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
GPC4O75487 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.8■□□□□ 0.92
GPC4O75487 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 AF106564.1-201ENST00000607058 2553 ntBASIC20.8■□□□□ 0.92
GPC4O75487 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GPC4O75487 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 AC026271.2-201ENST00000428091 497 ntBASIC20.8■□□□□ 0.92
GPC4O75487 AC079140.4-201ENST00000507448 529 ntBASIC20.8■□□□□ 0.92
GPC4O75487 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.8■□□□□ 0.92
GPC4O75487 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
GPC4O75487 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.8■□□□□ 0.92
GPC4O75487 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GPC4O75487 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.79■□□□□ 0.92
GPC4O75487 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.79■□□□□ 0.92
GPC4O75487 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GPC4O75487 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.79■□□□□ 0.92
GPC4O75487 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.79■□□□□ 0.92
GPC4O75487 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
GPC4O75487 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GPC4O75487 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GPC4O75487 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
GPC4O75487 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC4O75487 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
GPC4O75487 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GPC4O75487 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC4O75487 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.78■□□□□ 0.92
GPC4O75487 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.78■□□□□ 0.92
GPC4O75487 EEF1DP3-203ENST00000566025 782 ntBASIC20.78■□□□□ 0.92
GPC4O75487 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.78■□□□□ 0.92
GPC4O75487 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GPC4O75487 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC4O75487 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC4O75487 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC4O75487 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L2-201ENST00000561772 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 RARRES2P6-201ENST00000567333 442 ntBASIC20.77■□□□□ 0.92
GPC4O75487 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 AC087623.3-201ENST00000607047 1098 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L6-201ENST00000626483 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L1-201ENST00000627662 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L8-201ENST00000629013 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L3-201ENST00000630187 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L7-201ENST00000630678 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 DUX4L5-201ENST00000630834 1275 ntBASIC20.77■□□□□ 0.92
GPC4O75487 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GPC4O75487 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GPC4O75487 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.77■□□□□ 0.91
GPC4O75487 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GPC4O75487 KRT87P-202ENST00000534226 1464 ntBASIC20.76■□□□□ 0.91
GPC4O75487 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GPC4O75487 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms