Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH16O75309 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDH16O75309 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH16O75309 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDH16O75309 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH16O75309 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CDH16O75309 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH16O75309 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.03■□□□□ 0.96
CDH16O75309 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH16O75309 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH16O75309 SRD5A1P1-201ENST00000442297 786 ntBASIC21.03■□□□□ 0.96
CDH16O75309 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH16O75309 AL356740.2-201ENST00000601559 647 ntBASIC21.03■□□□□ 0.96
CDH16O75309 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH16O75309 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH16O75309 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
CDH16O75309 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH16O75309 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDH16O75309 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH16O75309 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.02■□□□□ 0.96
CDH16O75309 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.02■□□□□ 0.96
CDH16O75309 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH16O75309 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 AL162377.1-201ENST00000618844 1793 ntBASIC21.02■□□□□ 0.96
CDH16O75309 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.02■□□□□ 0.96
CDH16O75309 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH16O75309 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDH16O75309 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CDH16O75309 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH16O75309 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDH16O75309 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH16O75309 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.01■□□□□ 0.95
CDH16O75309 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDH16O75309 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH16O75309 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDH16O75309 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21■□□□□ 0.95
CDH16O75309 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21■□□□□ 0.95
CDH16O75309 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CDH16O75309 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21■□□□□ 0.95
CDH16O75309 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21■□□□□ 0.95
CDH16O75309 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CDH16O75309 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH16O75309 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH16O75309 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH16O75309 AL138724.1-201ENST00000606771 1088 ntBASIC20.99■□□□□ 0.95
CDH16O75309 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.99■□□□□ 0.95
CDH16O75309 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH16O75309 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH16O75309 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH16O75309 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH16O75309 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH16O75309 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH16O75309 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH16O75309 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH16O75309 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH16O75309 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH16O75309 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH16O75309 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH16O75309 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CDH16O75309 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH16O75309 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms