Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PTCD1O75127 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.89■■□□□ 1.89
PTCD1O75127 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PTCD1O75127 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PTCD1O75127 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.88■■□□□ 1.89
PTCD1O75127 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
PTCD1O75127 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 MCRIP2P1-201ENST00000394346 511 ntBASIC26.88■■□□□ 1.89
PTCD1O75127 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.88■■□□□ 1.89
PTCD1O75127 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.88■■□□□ 1.89
PTCD1O75127 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.88■■□□□ 1.89
PTCD1O75127 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.88■■□□□ 1.89
PTCD1O75127 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.88■■□□□ 1.89
PTCD1O75127 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
PTCD1O75127 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD1O75127 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PTCD1O75127 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.87■■□□□ 1.89
PTCD1O75127 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
PTCD1O75127 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD1O75127 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD1O75127 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PTCD1O75127 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.87■■□□□ 1.89
PTCD1O75127 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.87■■□□□ 1.89
PTCD1O75127 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.87■■□□□ 1.89
PTCD1O75127 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.87■■□□□ 1.89
PTCD1O75127 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.87■■□□□ 1.89
PTCD1O75127 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.87■■□□□ 1.89
PTCD1O75127 AL589743.5-201ENST00000616611 1050 ntBASIC26.87■■□□□ 1.89
PTCD1O75127 FAM99A-202ENST00000538190 1989 ntBASIC26.87■■□□□ 1.89
PTCD1O75127 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.87■■□□□ 1.89
PTCD1O75127 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.87■■□□□ 1.89
PTCD1O75127 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD1O75127 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD1O75127 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD1O75127 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.86■■□□□ 1.89
PTCD1O75127 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PTCD1O75127 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
PTCD1O75127 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.86■■□□□ 1.89
PTCD1O75127 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.86■■□□□ 1.89
PTCD1O75127 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.86■■□□□ 1.89
PTCD1O75127 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.86■■□□□ 1.89
PTCD1O75127 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD1O75127 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.86■■□□□ 1.89
PTCD1O75127 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PTCD1O75127 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.85■■□□□ 1.89
PTCD1O75127 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.85■■□□□ 1.89
PTCD1O75127 AC127496.7-201ENST00000625110 1798 ntBASIC26.85■■□□□ 1.89
PTCD1O75127 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.85■■□□□ 1.89
PTCD1O75127 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.85■■□□□ 1.89
PTCD1O75127 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
PTCD1O75127 AL359736.2-201ENST00000621992 437 ntBASIC26.85■■□□□ 1.89
PTCD1O75127 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD1O75127 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PTCD1O75127 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
PTCD1O75127 KRT18P68-201ENST00000392293 1000 ntBASIC26.84■■□□□ 1.89
PTCD1O75127 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
PTCD1O75127 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
PTCD1O75127 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.84■■□□□ 1.89
PTCD1O75127 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PTCD1O75127 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
PTCD1O75127 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PTCD1O75127 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.84■■□□□ 1.89
PTCD1O75127 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.84■■□□□ 1.89
PTCD1O75127 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.84■■□□□ 1.89
PTCD1O75127 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.83■■□□□ 1.89
PTCD1O75127 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PTCD1O75127 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PTCD1O75127 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PTCD1O75127 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PTCD1O75127 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.83■■□□□ 1.89
PTCD1O75127 AC008550.1-201ENST00000511500 884 ntBASIC26.83■■□□□ 1.89
PTCD1O75127 PNMA6B-201ENST00000538162 1200 ntBASIC26.83■■□□□ 1.89
PTCD1O75127 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.83■■□□□ 1.89
PTCD1O75127 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.83■■□□□ 1.89
PTCD1O75127 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PTCD1O75127 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PTCD1O75127 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
PTCD1O75127 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.83■■□□□ 1.88
PTCD1O75127 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
PTCD1O75127 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.82■■□□□ 1.88
PTCD1O75127 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms