Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IDH3BO43837 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
IDH3BO43837 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
IDH3BO43837 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.03■□□□□ 0.64
IDH3BO43837 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
IDH3BO43837 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
IDH3BO43837 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
IDH3BO43837 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.03■□□□□ 0.64
IDH3BO43837 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IDH3BO43837 AL020996.1-203ENST00000536896 2307 ntBASIC19.03■□□□□ 0.64
IDH3BO43837 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.03■□□□□ 0.64
IDH3BO43837 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IDH3BO43837 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IDH3BO43837 AP006587.3-201ENST00000525742 1516 ntBASIC19.03■□□□□ 0.64
IDH3BO43837 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
IDH3BO43837 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IDH3BO43837 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IDH3BO43837 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.02■□□□□ 0.64
IDH3BO43837 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.02■□□□□ 0.64
IDH3BO43837 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
IDH3BO43837 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.02■□□□□ 0.64
IDH3BO43837 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.02■□□□□ 0.64
IDH3BO43837 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.02■□□□□ 0.64
IDH3BO43837 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.02■□□□□ 0.64
IDH3BO43837 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
IDH3BO43837 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IDH3BO43837 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IDH3BO43837 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
IDH3BO43837 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IDH3BO43837 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IDH3BO43837 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IDH3BO43837 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.01■□□□□ 0.63
IDH3BO43837 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
IDH3BO43837 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
IDH3BO43837 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
IDH3BO43837 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 AC133561.4-201ENST00000566112 224 ntBASIC19.01■□□□□ 0.63
IDH3BO43837 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.01■□□□□ 0.63
IDH3BO43837 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.01■□□□□ 0.63
IDH3BO43837 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.01■□□□□ 0.63
IDH3BO43837 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
IDH3BO43837 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
IDH3BO43837 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.01■□□□□ 0.63
IDH3BO43837 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
IDH3BO43837 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19■□□□□ 0.63
IDH3BO43837 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19■□□□□ 0.63
IDH3BO43837 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19■□□□□ 0.63
IDH3BO43837 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19■□□□□ 0.63
IDH3BO43837 SMUG1P1-201ENST00000590640 811 ntBASIC19■□□□□ 0.63
IDH3BO43837 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19■□□□□ 0.63
IDH3BO43837 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
IDH3BO43837 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19■□□□□ 0.63
IDH3BO43837 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 AL049796.1-201ENST00000565336 1766 ntBASIC18.99■□□□□ 0.63
IDH3BO43837 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.99■□□□□ 0.63
IDH3BO43837 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.99■□□□□ 0.63
IDH3BO43837 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IDH3BO43837 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
IDH3BO43837 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.98■□□□□ 0.63
IDH3BO43837 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms