Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3FO00303 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3FO00303 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.4■□□□□ 0.86
EIF3FO00303 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.4■□□□□ 0.86
EIF3FO00303 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
EIF3FO00303 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
EIF3FO00303 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
EIF3FO00303 AC019069.1-201ENST00000610008 1333 ntBASIC20.4■□□□□ 0.86
EIF3FO00303 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
EIF3FO00303 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.4■□□□□ 0.86
EIF3FO00303 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3FO00303 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3FO00303 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3FO00303 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3FO00303 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
EIF3FO00303 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3FO00303 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3FO00303 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
EIF3FO00303 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3FO00303 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3FO00303 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
EIF3FO00303 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3FO00303 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3FO00303 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.38■□□□□ 0.85
EIF3FO00303 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3FO00303 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 RARRES2P11-201ENST00000635158 484 ntBASIC20.38■□□□□ 0.85
EIF3FO00303 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3FO00303 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EIF3FO00303 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3FO00303 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3FO00303 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.37■□□□□ 0.85
EIF3FO00303 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3FO00303 KRT18P61-201ENST00000585825 1298 ntBASIC20.37■□□□□ 0.85
EIF3FO00303 AC243732.1-201ENST00000612648 864 ntBASIC20.37■□□□□ 0.85
EIF3FO00303 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
EIF3FO00303 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.37■□□□□ 0.85
EIF3FO00303 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3FO00303 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3FO00303 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3FO00303 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.36■□□□□ 0.85
EIF3FO00303 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.36■□□□□ 0.85
EIF3FO00303 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3FO00303 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3FO00303 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.36■□□□□ 0.85
EIF3FO00303 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.36■□□□□ 0.85
EIF3FO00303 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.36■□□□□ 0.85
EIF3FO00303 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.36■□□□□ 0.85
EIF3FO00303 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
EIF3FO00303 SLC7A5P2-201ENST00000553010 536 ntBASIC20.36■□□□□ 0.85
EIF3FO00303 NTF6G-201ENST00000591094 616 ntBASIC20.36■□□□□ 0.85
EIF3FO00303 AC087623.3-201ENST00000607047 1098 ntBASIC20.36■□□□□ 0.85
EIF3FO00303 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
EIF3FO00303 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.36■□□□□ 0.85
EIF3FO00303 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.36■□□□□ 0.85
EIF3FO00303 AC121338.2-201ENST00000622535 1744 ntBASIC20.36■□□□□ 0.85
EIF3FO00303 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.35■□□□□ 0.85
EIF3FO00303 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3FO00303 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3FO00303 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3FO00303 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
EIF3FO00303 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3FO00303 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.34■□□□□ 0.85
EIF3FO00303 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.34■□□□□ 0.85
EIF3FO00303 AC011484.1-201ENST00000377652 1995 ntBASIC20.34■□□□□ 0.85
EIF3FO00303 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3FO00303 AC026271.2-201ENST00000428091 497 ntBASIC20.34■□□□□ 0.85
EIF3FO00303 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms