Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 AC244015.2-201ENST00000616358 1861 ntBASIC20.41■□□□□ 0.86
VGLL3A8MV65 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VGLL3A8MV65 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VGLL3A8MV65 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.4■□□□□ 0.86
VGLL3A8MV65 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
VGLL3A8MV65 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VGLL3A8MV65 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VGLL3A8MV65 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
VGLL3A8MV65 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
VGLL3A8MV65 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.39■□□□□ 0.86
VGLL3A8MV65 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.86
VGLL3A8MV65 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
VGLL3A8MV65 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 AC148477.6-201ENST00000623746 465 ntBASIC20.39■□□□□ 0.85
VGLL3A8MV65 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 HLA-L-211ENST00000482052 1765 ntBASIC20.39■□□□□ 0.85
VGLL3A8MV65 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VGLL3A8MV65 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VGLL3A8MV65 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 AC009053.2-201ENST00000563701 2365 ntBASIC20.38■□□□□ 0.85
VGLL3A8MV65 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VGLL3A8MV65 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
VGLL3A8MV65 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VGLL3A8MV65 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
VGLL3A8MV65 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
VGLL3A8MV65 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
VGLL3A8MV65 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
VGLL3A8MV65 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VGLL3A8MV65 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VGLL3A8MV65 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms