Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.3■■□□□ 1
SMIM23A6NLE4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SMIM23A6NLE4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SMIM23A6NLE4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SMIM23A6NLE4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.3■■□□□ 1
SMIM23A6NLE4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SMIM23A6NLE4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.29■■□□□ 1
SMIM23A6NLE4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SMIM23A6NLE4 AC027702.1-201ENST00000563810 1770 ntBASIC21.29■■□□□ 1
SMIM23A6NLE4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMIM23A6NLE4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SMIM23A6NLE4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SMIM23A6NLE4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SMIM23A6NLE4 AC010525.1-201ENST00000585559 441 ntBASIC21.29■■□□□ 1
SMIM23A6NLE4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.29■■□□□ 1
SMIM23A6NLE4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMIM23A6NLE4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SMIM23A6NLE4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SMIM23A6NLE4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.28■■□□□ 1
SMIM23A6NLE4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.28■■□□□ 1
SMIM23A6NLE4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SMIM23A6NLE4 AL034346.1-201ENST00000568244 1277 ntBASIC21.28■■□□□ 1
SMIM23A6NLE4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.28■■□□□ 1
SMIM23A6NLE4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.28■■□□□ 1
SMIM23A6NLE4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SMIM23A6NLE4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM23A6NLE4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SMIM23A6NLE4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMIM23A6NLE4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.27■■□□□ 1
SMIM23A6NLE4 OR2I1P-207ENST00000453522 948 ntBASIC21.27■■□□□ 1
SMIM23A6NLE4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.27■■□□□ 1
SMIM23A6NLE4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMIM23A6NLE4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.27■■□□□ 1
SMIM23A6NLE4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.27■■□□□ 1
SMIM23A6NLE4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM23A6NLE4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.27■□□□□ 0.99
SMIM23A6NLE4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 MIR3181-201ENST00000578512 73 ntBASIC21.26■□□□□ 0.99
SMIM23A6NLE4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM23A6NLE4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM23A6NLE4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms