Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 KRT18P21-201ENST00000515767 1272 ntBASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRABD2BA6NFA1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 AC060766.5-201ENST00000590539 871 ntBASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRABD2BA6NFA1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 LINC01960-201ENST00000563759 1884 ntBASIC20.05■□□□□ 0.8
TRABD2BA6NFA1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 KRT16P2-201ENST00000414673 1423 ntBASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 KRT17P3-201ENST00000420566 1262 ntBASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 RN7SL471P-201ENST00000580476 299 ntBASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 HLA-B-256ENST00000639848 1089 ntBASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 LINC00565-201ENST00000562710 2331 ntBASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRABD2BA6NFA1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 KRT17P1-201ENST00000399211 1546 ntBASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 EP400NL-214ENST00000641289 2402 ntBASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 AL355472.2-201ENST00000422958 438 ntBASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 AC243732.1-201ENST00000612648 864 ntBASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.03■□□□□ 0.8
TRABD2BA6NFA1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRABD2BA6NFA1 AC233723.2-201ENST00000623798 2106 ntBASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms