Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.2■■□□□ 1.15
RCCD1A6NED2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 AL162377.1-201ENST00000618844 1793 ntBASIC22.2■■□□□ 1.14
RCCD1A6NED2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RCCD1A6NED2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.2■■□□□ 1.14
RCCD1A6NED2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.19■■□□□ 1.14
RCCD1A6NED2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.19■■□□□ 1.14
RCCD1A6NED2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.19■■□□□ 1.14
RCCD1A6NED2 AC233992.3-201ENST00000607491 485 ntBASIC22.19■■□□□ 1.14
RCCD1A6NED2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RCCD1A6NED2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RCCD1A6NED2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RCCD1A6NED2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 AC009237.3-201ENST00000393279 1427 ntBASIC22.18■■□□□ 1.14
RCCD1A6NED2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RCCD1A6NED2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RCCD1A6NED2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 FP700111.2-201ENST00000619190 1892 ntBASIC22.17■■□□□ 1.14
RCCD1A6NED2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 UNC93B3-201ENST00000308076 687 ntBASIC22.17■■□□□ 1.14
RCCD1A6NED2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 IGHV3-19-201ENST00000521488 291 ntBASIC22.17■■□□□ 1.14
RCCD1A6NED2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.17■■□□□ 1.14
RCCD1A6NED2 AC005224.4-201ENST00000583262 1652 ntBASIC22.17■■□□□ 1.14
RCCD1A6NED2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RCCD1A6NED2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RCCD1A6NED2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.16■■□□□ 1.14
RCCD1A6NED2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RCCD1A6NED2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RCCD1A6NED2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RCCD1A6NED2 AC024257.2-201ENST00000549699 147 ntBASIC22.16■■□□□ 1.14
RCCD1A6NED2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RCCD1A6NED2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RCCD1A6NED2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RCCD1A6NED2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.16■■□□□ 1.14
RCCD1A6NED2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RCCD1A6NED2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RCCD1A6NED2 AL136116.3-201ENST00000402907 1138 ntBASIC22.15■■□□□ 1.14
RCCD1A6NED2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RCCD1A6NED2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RCCD1A6NED2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RCCD1A6NED2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RCCD1A6NED2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms