Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.72■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ID1-201ENST00000376105 1233 ntBASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.71■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AL034346.1-201ENST00000568244 1277 ntBASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC104187.1-201ENST00000607510 612 ntBASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AC073111.5-205ENST00000641717 521 ntBASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TCRBV4S1A1TA0A5B7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV4S1A1TA0A5B7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms