Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC104187.1-201ENST00000607510 612 ntBASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 MIR5787-201ENST00000611784 55 ntBASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV2A0A0B4J234 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 SLC7A5P1-201ENST00000568957 537 ntBASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 NTF6G-201ENST00000591094 616 ntBASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 AC004854.2-201ENST00000608450 1441 ntBASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV2A0A0B4J234 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV2A0A0B4J234 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV2A0A0B4J234 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV2A0A0B4J234 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV2A0A0B4J234 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV2A0A0B4J234 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.71■□□□□ 0.1
TRAV2A0A0B4J234 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 SLC25A24-204ENST00000569674 2357 ntBASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV2A0A0B4J234 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms