Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV5A0A0B4J1U4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV5A0A0B4J1U4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV5A0A0B4J1U4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRGV5A0A0B4J1U4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRGV5A0A0B4J1U4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 LSM12P1-201ENST00000411836 588 ntBASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 AC007322.3-201ENST00000426526 701 ntBASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 AC097658.1-201ENST00000475555 843 ntBASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRGV5A0A0B4J1U4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV5A0A0B4J1U4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms