Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC187A0A096LP49 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 PNMA6B-201ENST00000538162 1200 ntBASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 FAM197Y4-202ENST00000622692 608 ntBASIC19.83■□□□□ 0.77
CCDC187A0A096LP49 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC187A0A096LP49 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 MIR718-201ENST00000390190 70 ntBASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 KRT17P3-201ENST00000420566 1262 ntBASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 AC092368.3-202ENST00000574180 1591 ntBASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC187A0A096LP49 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 KRT18P68-201ENST00000392293 1000 ntBASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC187A0A096LP49 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 AC007322.3-201ENST00000426526 701 ntBASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 RPPH1-201ENST00000516869 333 ntBASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC187A0A096LP49 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 C1QBPP2-201ENST00000528754 825 ntBASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC187A0A096LP49 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms