Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 BEAN1-AS1-203ENST00000569125 530 ntTSL 4 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 AL357137.1-201ENST00000604645 203 ntBASIC10.82□□□□□ -0.68
LMO3Q8TAP4 AP000435.2-201ENST00000610280 940 ntBASIC10.82□□□□□ -0.68
LMO3Q8TAP4 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 LINC01002-203ENST00000631484 754 ntTSL 3 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 LINC01002-230ENST00000633592 568 ntTSL 5 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 DERA-204ENST00000526530 1619 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 LINC00941-201ENST00000547804 1645 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 DUSP6-201ENST00000279488 4400 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 PTRH2-202ENST00000409433 2246 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 AC138470.1-201ENST00000624638 1897 ntBASIC10.82□□□□□ -0.68
LMO3Q8TAP4 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 GALNT8-201ENST00000252318 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 FAM111B-204ENST00000529618 2364 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 AC109449.1-201ENST00000567108 1686 ntBASIC10.82□□□□□ -0.68
LMO3Q8TAP4 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 AL359852.1-201ENST00000624609 2197 ntBASIC10.82□□□□□ -0.68
LMO3Q8TAP4 TMEM130-205ENST00000450876 3891 ntTSL 2 BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 TMPRSS13-207ENST00000528626 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LMO3Q8TAP4 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 SORD2P-202ENST00000561384 2498 ntTSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 ASH2LP3-201ENST00000436538 1642 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LPCAT2BP-201ENST00000420263 1534 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 OPN5-203ENST00000393699 1142 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LINC01276-201ENST00000416951 816 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AL365356.4-201ENST00000425246 613 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 RNASE11-204ENST00000432835 946 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC073873.1-201ENST00000433950 276 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC099066.3-201ENST00000434499 301 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 MID1IP1-AS1-201ENST00000436893 376 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 C6orf52-204ENST00000460742 541 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AL121612.1-201ENST00000490252 615 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LINC02065-201ENST00000509924 562 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC124242.2-201ENST00000517431 1119 ntBASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC005832.4-201ENST00000536588 818 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 RNF41-211ENST00000552656 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC117569.1-202ENST00000581532 557 ntTSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AP001029.2-201ENST00000586591 361 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 LINC01841-202ENST00000588438 523 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 AL359198.1-201ENST00000610263 571 ntTSL 3 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 PKD1L2-205ENST00000527937 4165 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 ACSM6-203ENST00000394005 1592 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 MCPH1-203ENST00000519480 2917 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 PNLIPRP1-221ENST00000534537 1459 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
LMO3Q8TAP4 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 PTPN2-210ENST00000591115 1648 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SUCLA2P3-201ENST00000458157 1357 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SP100-201ENST00000264052 3882 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 COX7C-201ENST00000247655 666 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 TSPAN7-201ENST00000286824 1270 ntTSL 2 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 TSACC-204ENST00000368254 598 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LMO3Q8TAP4 SNORA48B-201ENST00000390912 135 ntBASIC10.8□□□□□ -0.68
LMO3Q8TAP4 AL358473.2-202ENST00000415359 508 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms