Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 RNA5SP194-201ENST00000364662 113 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 DLG2-206ENST00000398304 783 ntTSL 3 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AL137022.1-201ENST00000424386 392 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 PSME2P6-201ENST00000426373 327 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC022395.1-201ENST00000451610 895 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC139887.1-201ENST00000454037 286 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 FLJ42102-202ENST00000460880 1116 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC005280.1-201ENST00000515412 537 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 IL32-216ENST00000529699 672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZSCAN9-208ENST00000531981 854 ntTSL 4 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 STIP1-211ENST00000543847 772 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC137055.1-201ENST00000549333 395 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC100791.2-201ENST00000570512 607 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC002128.1-201ENST00000602262 1016 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC135178.5-201ENST00000602597 674 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 HP-218ENST00000613898 1107 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC092745.3-201ENST00000622868 216 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 PSMC1P11-201ENST00000405257 1317 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 MILR1-206ENST00000619286 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 AC102945.2-201ENST00000623026 1422 ntBASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ADIPOQ-201ENST00000320741 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 CYP4B1-214ENST00000614163 1534 ntTSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 CCDC172-201ENST00000333254 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 HSPA14-201ENST00000378372 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 FCRLA-213ENST00000540521 1942 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ANGPTL7-201ENST00000376819 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 NEFM-202ENST00000433454 2519 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 TRAF3IP2-201ENST00000340026 2785 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ZNF304-204ENST00000598744 3331 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
NPIPA3F8WFD2 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RASGRP3-201ENST00000402538 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 MARS2-201ENST00000282276 3019 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 ARNTL-204ENST00000403482 2389 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 ADAT2-201ENST00000237283 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 NBPF3-213ENST00000619554 1831 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 CXorf36-202ENST00000398000 4655 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 NUDT4-204ENST00000547014 1419 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 LIN37-201ENST00000301159 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 OR6Q1-201ENST00000302622 1002 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 OR2T12-201ENST00000317996 1066 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 OR6T1-201ENST00000321252 1089 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC007207.1-202ENST00000393388 498 ntTSL 3 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 SNAPC5P1-201ENST00000403621 301 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AP000552.2-201ENST00000422450 689 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 IFNWP15-201ENST00000442022 600 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 BANF1P5-201ENST00000445285 259 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 TMBIM1-215ENST00000445635 1251 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RPL7L1P2-201ENST00000446889 739 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 SPAG11A-206ENST00000454911 521 ntTSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 MTHFD2P1-202ENST00000489784 871 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 NR1I3-217ENST00000502985 774 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC011481.1-201ENST00000591646 361 ntTSL 3 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RN7SL539P-201ENST00000610974 291 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RN7SL196P-201ENST00000614361 291 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 RN7SL286P-201ENST00000616519 291 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 FAM166B-206ENST00000619051 1026 ntTSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC233724.15-201ENST00000621430 236 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 LINC01002-217ENST00000632405 600 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 KCNMA1-225ENST00000626620 3660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 CCDC87-201ENST00000333861 2908 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 DNAJC17-201ENST00000220496 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 UBE2L5P-203ENST00000638137 2176 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 NDUFB4P11-202ENST00000600530 2079 ntBASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
NPIPA3F8WFD2 MED18-201ENST00000373842 1833 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 366.6 ms