Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC35.22■■■■□ 3.23
BIVM-ERCC5R4GMW8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 AC008550.1-201ENST00000511500 884 ntBASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 AC010542.4-201ENST00000563151 1910 ntBASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 AL589743.5-201ENST00000616611 1050 ntBASIC35.21■■■■□ 3.23
BIVM-ERCC5R4GMW8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 CYP21A1P-202ENST00000354927 1481 ntBASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC35.2■■■■□ 3.23
BIVM-ERCC5R4GMW8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
BIVM-ERCC5R4GMW8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC092368.3-202ENST00000574180 1591 ntBASIC35.18■■■■□ 3.22
BIVM-ERCC5R4GMW8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 MME-217ENST00000616757 1315 ntTSL 5 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 RPS2P4-201ENST00000476944 856 ntBASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC35.17■■■■□ 3.22
BIVM-ERCC5R4GMW8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC35.16■■■■□ 3.22
BIVM-ERCC5R4GMW8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC35.16■■■■□ 3.22
BIVM-ERCC5R4GMW8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC35.16■■■■□ 3.22
BIVM-ERCC5R4GMW8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
BIVM-ERCC5R4GMW8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
BIVM-ERCC5R4GMW8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC35.15■■■■□ 3.22
BIVM-ERCC5R4GMW8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
BIVM-ERCC5R4GMW8 SOX15-203ENST00000570788 1093 ntBASIC35.14■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms