Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 AC087289.5-201ENST00000586076 3175 ntBASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 AC092028.1-203ENST00000608262 953 ntBASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX5Q9Y5X3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX5Q9Y5X3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 KRT125P-201ENST00000546827 989 ntBASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX5Q9Y5X3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX5Q9Y5X3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 Z92544.1-202ENST00000571933 1220 ntBASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX5Q9Y5X3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 AC006128.1-201ENST00000624704 1661 ntBASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX5Q9Y5X3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms