Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 DUX4L1-201ENST00000627662 1275 ntBASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 DUX4L8-201ENST00000629013 1275 ntBASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 DUX4L3-201ENST00000630187 1275 ntBASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 DUX4L7-201ENST00000630678 1275 ntBASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 DUX4L5-201ENST00000630834 1275 ntBASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHRNA9Q9UGM1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 AC034268.1-201ENST00000441047 882 ntBASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 RARRES2P6-201ENST00000567333 442 ntBASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 AC087623.3-201ENST00000607047 1098 ntBASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHRNA9Q9UGM1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA9Q9UGM1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AL049796.1-201ENST00000565336 1766 ntBASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AC026271.2-201ENST00000428091 497 ntBASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AC138907.5-202ENST00000569484 235 ntBASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA9Q9UGM1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA9Q9UGM1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 AC004854.2-201ENST00000608450 1441 ntBASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 AC104187.1-201ENST00000607510 612 ntBASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 AC008175.2-201ENST00000612840 297 ntBASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 AP004607.4-201ENST00000530158 1459 ntBASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNA9Q9UGM1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA9Q9UGM1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA9Q9UGM1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms