Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NCKIPSDQ9NZQ3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 AC011767.1-201ENST00000617410 1153 ntBASIC21.08■□□□□ 0.97
NCKIPSDQ9NZQ3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NCKIPSDQ9NZQ3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.96
NCKIPSDQ9NZQ3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NCKIPSDQ9NZQ3 AC005224.4-201ENST00000583262 1652 ntBASIC21.08■□□□□ 0.96
NCKIPSDQ9NZQ3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NCKIPSDQ9NZQ3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.06■□□□□ 0.96
NCKIPSDQ9NZQ3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.05■□□□□ 0.96
NCKIPSDQ9NZQ3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NCKIPSDQ9NZQ3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
NCKIPSDQ9NZQ3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms