Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF216Q9NWF9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF216Q9NWF9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 ACTR6P1-201ENST00000514311 1104 ntBASIC23.67■■□□□ 1.38
RNF216Q9NWF9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 FGA-203ENST00000622532 1130 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 AC009237.3-201ENST00000393279 1427 ntBASIC23.67■■□□□ 1.38
RNF216Q9NWF9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF216Q9NWF9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 AL390039.1-201ENST00000399148 611 ntBASIC23.66■■□□□ 1.38
RNF216Q9NWF9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 AC073111.5-205ENST00000641717 521 ntBASIC23.66■■□□□ 1.38
RNF216Q9NWF9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RNF216Q9NWF9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 RPS20P25-201ENST00000412447 352 ntBASIC23.65■■□□□ 1.38
RNF216Q9NWF9 AC073310.1-201ENST00000423226 1033 ntBASIC23.65■■□□□ 1.38
RNF216Q9NWF9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 AC242852.2-201ENST00000615738 1807 ntBASIC23.65■■□□□ 1.38
RNF216Q9NWF9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF216Q9NWF9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF216Q9NWF9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF216Q9NWF9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF216Q9NWF9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 HLA-L-209ENST00000420110 1011 ntBASIC23.64■■□□□ 1.37
RNF216Q9NWF9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 KRT18P61-201ENST00000585825 1298 ntBASIC23.64■■□□□ 1.37
RNF216Q9NWF9 RPAP2P1-201ENST00000603626 1168 ntBASIC23.64■■□□□ 1.37
RNF216Q9NWF9 MTDHP1-201ENST00000605323 784 ntBASIC23.64■■□□□ 1.37
RNF216Q9NWF9 AC093783.1-201ENST00000612976 329 ntBASIC23.64■■□□□ 1.37
RNF216Q9NWF9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF216Q9NWF9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 AC013470.3-201ENST00000420252 1194 ntBASIC23.63■■□□□ 1.37
RNF216Q9NWF9 CDCA4P2-201ENST00000441182 718 ntBASIC23.63■■□□□ 1.37
RNF216Q9NWF9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF216Q9NWF9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 AL392088.1-201ENST00000428364 670 ntBASIC23.62■■□□□ 1.37
RNF216Q9NWF9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 RAP2CP1-201ENST00000605103 478 ntBASIC23.62■■□□□ 1.37
RNF216Q9NWF9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF216Q9NWF9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF216Q9NWF9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms