Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 AC005229.4-201ENST00000610085 2198 ntBASIC21.85■■□□□ 1.09
CD248Q9HCU0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD248Q9HCU0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CD248Q9HCU0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 KRT87P-202ENST00000534226 1464 ntBASIC21.84■■□□□ 1.09
CD248Q9HCU0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.84■■□□□ 1.09
CD248Q9HCU0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD248Q9HCU0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CD248Q9HCU0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.83■■□□□ 1.09
CD248Q9HCU0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.83■■□□□ 1.09
CD248Q9HCU0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD248Q9HCU0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CD248Q9HCU0 AC104187.1-201ENST00000607510 612 ntBASIC21.83■■□□□ 1.09
CD248Q9HCU0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.83■■□□□ 1.08
CD248Q9HCU0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CD248Q9HCU0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CD248Q9HCU0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
CD248Q9HCU0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CD248Q9HCU0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CD248Q9HCU0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CD248Q9HCU0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CD248Q9HCU0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 AL157384.1-201ENST00000445995 2473 ntBASIC21.82■■□□□ 1.08
CD248Q9HCU0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.82■■□□□ 1.08
CD248Q9HCU0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 AC055733.4-201ENST00000638462 1354 ntBASIC21.82■■□□□ 1.08
CD248Q9HCU0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD248Q9HCU0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.81■■□□□ 1.08
CD248Q9HCU0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CD248Q9HCU0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD248Q9HCU0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CD248Q9HCU0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD248Q9HCU0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.79■■□□□ 1.08
CD248Q9HCU0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD248Q9HCU0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD248Q9HCU0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.79■■□□□ 1.08
CD248Q9HCU0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CD248Q9HCU0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CD248Q9HCU0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD248Q9HCU0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.79■■□□□ 1.08
CD248Q9HCU0 AC006970.2-201ENST00000450065 779 ntBASIC21.79■■□□□ 1.08
CD248Q9HCU0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD248Q9HCU0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.78■■□□□ 1.08
CD248Q9HCU0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.78■■□□□ 1.08
CD248Q9HCU0 MIR663A-201ENST00000385250 93 ntBASIC21.78■■□□□ 1.08
CD248Q9HCU0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD248Q9HCU0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.78■■□□□ 1.08
CD248Q9HCU0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms