Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SOX17Q9H6I2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 KRT19P1-201ENST00000405746 1186 ntBASIC20.2■□□□□ 0.82
SOX17Q9H6I2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SOX17Q9H6I2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 AC244015.2-201ENST00000616358 1861 ntBASIC20.19■□□□□ 0.82
SOX17Q9H6I2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.19■□□□□ 0.82
SOX17Q9H6I2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 KRT87P-202ENST00000534226 1464 ntBASIC20.18■□□□□ 0.82
SOX17Q9H6I2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SOX17Q9H6I2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
SOX17Q9H6I2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.17■□□□□ 0.82
SOX17Q9H6I2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 AC104187.1-201ENST00000607510 612 ntBASIC20.16■□□□□ 0.82
SOX17Q9H6I2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SOX17Q9H6I2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms