Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 SLC25A24-204ENST00000569674 2357 ntBASIC22.77■■□□□ 1.24
NDST4Q9H3R1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.77■■□□□ 1.24
NDST4Q9H3R1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.76■■□□□ 1.23
NDST4Q9H3R1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 AC142381.2-201ENST00000566120 298 ntBASIC22.76■■□□□ 1.23
NDST4Q9H3R1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 AC121338.2-201ENST00000622535 1744 ntBASIC22.76■■□□□ 1.23
NDST4Q9H3R1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.76■■□□□ 1.23
NDST4Q9H3R1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 AL358852.1-201ENST00000623174 1268 ntBASIC22.75■■□□□ 1.23
NDST4Q9H3R1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
NDST4Q9H3R1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
NDST4Q9H3R1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 MIR6084-201ENST00000622012 110 ntBASIC22.73■■□□□ 1.23
NDST4Q9H3R1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NDST4Q9H3R1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 AC061975.6-201ENST00000579045 1553 ntBASIC22.72■■□□□ 1.23
NDST4Q9H3R1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
NDST4Q9H3R1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NDST4Q9H3R1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NDST4Q9H3R1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms