Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 SLC7A5P1-201ENST00000568957 537 ntBASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 AC013268.1-206ENST00000638368 961 ntBASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 AC112229.1-201ENST00000639295 961 ntBASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RPAP1Q9BWH6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
RPAP1Q9BWH6 AF201337.1-201ENST00000520239 748 ntBASIC25.45■■□□□ 1.67
RPAP1Q9BWH6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.45■■□□□ 1.67
RPAP1Q9BWH6 TMEM191A-211ENST00000637163 1067 ntBASIC25.45■■□□□ 1.67
RPAP1Q9BWH6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RPAP1Q9BWH6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
RPAP1Q9BWH6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 AC007322.4-201ENST00000509611 723 ntBASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.44■■□□□ 1.66
RPAP1Q9BWH6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RPAP1Q9BWH6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 CYP2T1P-201ENST00000432607 1285 ntBASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RPAP1Q9BWH6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 AC098934.4-201ENST00000564127 592 ntBASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 AC053503.5-201ENST00000601508 636 ntBASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.41■■□□□ 1.66
RPAP1Q9BWH6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 AL024507.2-201ENST00000606070 2574 ntBASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 TSPY20P-201ENST00000450910 630 ntBASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPAP1Q9BWH6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RPAP1Q9BWH6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RPAP1Q9BWH6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.39■■□□□ 1.66
RPAP1Q9BWH6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
RPAP1Q9BWH6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RPAP1Q9BWH6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 AC105036.2-201ENST00000569468 176 ntBASIC25.39■■□□□ 1.65
RPAP1Q9BWH6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.39■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms