Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 AC013268.1-206ENST00000638368 961 ntBASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 AC112229.1-201ENST00000639295 961 ntBASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM62Q9BVG3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM62Q9BVG3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM62Q9BVG3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 RBM17P2-201ENST00000616397 1405 ntBASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM62Q9BVG3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 AC004911.1-201ENST00000416316 871 ntBASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 TERF1P5-201ENST00000477545 1207 ntBASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 AC231657.2-201ENST00000624556 255 ntBASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM62Q9BVG3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 AC007322.4-201ENST00000509611 723 ntBASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 AC080038.1-201ENST00000611274 1154 ntBASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM62Q9BVG3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM62Q9BVG3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM62Q9BVG3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 DUX4L16-201ENST00000555130 1264 ntBASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM62Q9BVG3 AL162412.1-201ENST00000567129 965 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms