Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDHD3Q9BSH5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 BX842568.3-201ENST00000418104 571 ntBASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 AC133561.4-201ENST00000566112 224 ntBASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDHD3Q9BSH5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDHD3Q9BSH5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 UNC93B3-201ENST00000308076 687 ntBASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HDHD3Q9BSH5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 GABARAPL3-202ENST00000624044 1851 ntBASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HDHD3Q9BSH5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 AC126544.1-201ENST00000580842 1059 ntBASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HDHD3Q9BSH5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HDHD3Q9BSH5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms