Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB18PQ96TA0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 AC123595.1-201ENST00000440769 1046 ntBASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 TERF1P2-201ENST00000583350 1212 ntBASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
PCDHB18PQ96TA0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 AC006128.1-201ENST00000624704 1661 ntBASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB18PQ96TA0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 AP004607.4-201ENST00000530158 1459 ntBASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 YBX1P1-201ENST00000445822 960 ntBASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 CCDC92B-201ENST00000575506 885 ntBASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 AC121338.2-201ENST00000622535 1744 ntBASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHB18PQ96TA0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 AC138907.5-202ENST00000569484 235 ntBASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHB18PQ96TA0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
PCDHB18PQ96TA0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB18PQ96TA0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.14■■□□□ 1.14
PCDHB18PQ96TA0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB18PQ96TA0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB18PQ96TA0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms