Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC123595.1-201ENST00000440769 1046 ntBASIC19.77■□□□□ 0.76
BBS4Q96RK4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS4Q96RK4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS4Q96RK4 KRT87P-202ENST00000534226 1464 ntBASIC19.77■□□□□ 0.76
BBS4Q96RK4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS4Q96RK4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BBS4Q96RK4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.77■□□□□ 0.75
BBS4Q96RK4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.77■□□□□ 0.75
BBS4Q96RK4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
BBS4Q96RK4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
BBS4Q96RK4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
BBS4Q96RK4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.76■□□□□ 0.75
BBS4Q96RK4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 AL049796.1-201ENST00000565336 1766 ntBASIC19.76■□□□□ 0.75
BBS4Q96RK4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.76■□□□□ 0.75
BBS4Q96RK4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
BBS4Q96RK4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS4Q96RK4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.75■□□□□ 0.75
BBS4Q96RK4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.75■□□□□ 0.75
BBS4Q96RK4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.75■□□□□ 0.75
BBS4Q96RK4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BBS4Q96RK4 YBX1P1-201ENST00000445822 960 ntBASIC19.75■□□□□ 0.75
BBS4Q96RK4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS4Q96RK4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
BBS4Q96RK4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BBS4Q96RK4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BBS4Q96RK4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.74■□□□□ 0.75
BBS4Q96RK4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
BBS4Q96RK4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BBS4Q96RK4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BBS4Q96RK4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BBS4Q96RK4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BBS4Q96RK4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BBS4Q96RK4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BBS4Q96RK4 AC008175.2-201ENST00000612840 297 ntBASIC19.73■□□□□ 0.75
BBS4Q96RK4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BBS4Q96RK4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.73■□□□□ 0.75
BBS4Q96RK4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BBS4Q96RK4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BBS4Q96RK4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
BBS4Q96RK4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.72■□□□□ 0.75
BBS4Q96RK4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.72■□□□□ 0.75
BBS4Q96RK4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BBS4Q96RK4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
BBS4Q96RK4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.72■□□□□ 0.75
BBS4Q96RK4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BBS4Q96RK4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
BBS4Q96RK4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BBS4Q96RK4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
BBS4Q96RK4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms