Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR939-201ENST00000401314 82 ntBASIC18.95■□□□□ 0.62
SNX18Q96RF0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 RARRES2P6-201ENST00000567333 442 ntBASIC18.95■□□□□ 0.62
SNX18Q96RF0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.95■□□□□ 0.62
SNX18Q96RF0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SNX18Q96RF0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 IGHV3-19-201ENST00000521488 291 ntBASIC18.94■□□□□ 0.62
SNX18Q96RF0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SNX18Q96RF0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.94■□□□□ 0.62
SNX18Q96RF0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 AC091305.1-201ENST00000479476 895 ntBASIC18.93■□□□□ 0.62
SNX18Q96RF0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.93■□□□□ 0.62
SNX18Q96RF0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SNX18Q96RF0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.92■□□□□ 0.62
SNX18Q96RF0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNX18Q96RF0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 AC008764.7-201ENST00000593779 1081 ntBASIC18.91■□□□□ 0.62
SNX18Q96RF0 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.91■□□□□ 0.62
SNX18Q96RF0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNX18Q96RF0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNX18Q96RF0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms